| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1039 |
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| Symbol | |
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| ID | 5612830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1235181 |
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| End bp | 1235525 |
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| Gene Length | 345 bp |
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| Protein Length | 114 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931887 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472778 |
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| Protein GI | 157374178 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0141429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.686037 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCCCTA CTGTATTGAA GATTATTTTT ATCGCTATCG GGATTGTCCT CGCCTATAAA
TTGATATTCA GCGGTAAGAA GGGACTCTCG ATTTTTGAGA TGCATTTTAA GGATGGCAGG
TTAGCCTCCC ATAAAGGAAA GATCCCGGAG AAGTTTCAAA AAGAATGCCG CGCGATCGCC
AAGGCAGAGA AGCTTACCTG TTCAGTCAGA TGCGAAAAAG TCGGTACTGT CAGGCTGCAT
GTATCAGCCA ATGTGAGCGA CGATATCACC CAACGGATCC GTAACCTGTT CCCGTTCGAG
TATTACGACA AGAAGCAGGT CGATAACAGC CGTCAGGCGG GTTAA
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| Protein sequence | MTPTVLKIIF IAIGIVLAYK LIFSGKKGLS IFEMHFKDGR LASHKGKIPE KFQKECRAIA
KAEKLTCSVR CEKVGTVRLH VSANVSDDIT QRIRNLFPFE YYDKKQVDNS RQAG
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