| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1031 |
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| Symbol | |
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| ID | 5610315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1227131 |
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| End bp | 1228426 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931879 |
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| Product | Signal transduction histidine kinase-like protein |
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| Protein accession | YP_001472770 |
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| Protein GI | 157374170 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.286161 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.755502 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATGA CTAAATCGGT TCGTGCGGCG ATAGCCTTAT CTATCAGTTT TAGCATTGCA
GCCTTGCTGA GTCAGGCTAT CTTCTATGAC GTCATAGACA GACTCGCCAT GAGTAGCTTC
AATGACAACC TTCTGGAGTA TCAGACTCAG GTCAAAAACA GTGTTGAAAA CACCAATCCA
AATCAGTGGC AACAGAAGGC GGCGCAGCTT TCCGATGAGT TAAATACCCC CGTCTATCTC
GACAAACGAG ATCAGGACAA CTTCACTCAG GATATCCTAG GACAGCTTGA CTCAGAGATA
GGCAGTAACG GTATTATCGA CCCGGATATG GGGCTTATTT ACTACCCTAT TTCGAAGGAG
TATGCGCTAA CCGTCGGCCC TTTCGATGAT ATGACCTTGG CCTATGCGGC AGAAATATTC
ACCTGGCTGT TTGCCCTGCT CACCGCTATC GCAACCTTTA CCCTGTTACA TCATCAAGAG
AGAAAAGCAC TACAACGCCT CAGTGACTCG CTATATCTTG AAAATCCCCC CTCCCCCTCG
CAGATAAGTA TCGACTCATT GCAAGCTCAG GCAGACCTGA TGTCGGACAC AAATCGGCAA
AAATCGACCG CGCTGGATCA GTTACTCATC ACCCAGAGAG ACCTCCTCCA TGGGGTCGCC
CATGAGTTCC GCAGTCCTCT GGCTAGAATG GAGTTCGCCA TAGAACTGCT CGAAGAGGCC
GATGAAAATA AGCGTTCACA GCTTAAGGGG CAACTCGAAC GTTCGATTAA AGAGCTCGAT
GAACTCGTCA AACAGGTGCT GCGTTACTCC CGACTTCAAC ACGATGGAGC GGAACTGGAG
CTAGGCTCAA TAGGTACCAG AGAGCTTATC GAGCGCTCGG TTGAGAAAGT GCAACACTTC
TATCCCAAGA TCCAATTTAG CATCCATGAT GAGACTCAGT GTCAGTTAAG GTGCGACATC
AAATTGATGG TGATAGCCCT ATCAAACATA TTGAGAAATG CGGGGCGCTT CGCTTACGCT
AAATGCCTCA TCACGGTAGC GAGCCAGCAT AACGCTTTAA CAATCAGCAT TCAGGATGAT
GGCTCCGGCC TCGCTCCGGG CAAGAAGAAA CAGATATTTG AGCCTTTTAC CCGTCTAGAC
CCCAGCCGTT CACGTGACTC GGGAGGTTAT GGGTTAGGGC TCGCGATAGT CCAATCGATT
GTCCATAAAC ATGATGGCAG TATCGCTGTG GAGGACGCAC CGATAGGGGG GGCAAATTTT
ATCATCACAC TGGAAAATTC AGGTGCAAAT AACTAA
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| Protein sequence | MIMTKSVRAA IALSISFSIA ALLSQAIFYD VIDRLAMSSF NDNLLEYQTQ VKNSVENTNP
NQWQQKAAQL SDELNTPVYL DKRDQDNFTQ DILGQLDSEI GSNGIIDPDM GLIYYPISKE
YALTVGPFDD MTLAYAAEIF TWLFALLTAI ATFTLLHHQE RKALQRLSDS LYLENPPSPS
QISIDSLQAQ ADLMSDTNRQ KSTALDQLLI TQRDLLHGVA HEFRSPLARM EFAIELLEEA
DENKRSQLKG QLERSIKELD ELVKQVLRYS RLQHDGAELE LGSIGTRELI ERSVEKVQHF
YPKIQFSIHD ETQCQLRCDI KLMVIALSNI LRNAGRFAYA KCLITVASQH NALTISIQDD
GSGLAPGKKK QIFEPFTRLD PSRSRDSGGY GLGLAIVQSI VHKHDGSIAV EDAPIGGANF
IITLENSGAN N
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