| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1028 |
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| Symbol | |
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| ID | 5610203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1224666 |
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| End bp | 1225883 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931876 |
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| Product | peptidase M24 |
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| Protein accession | YP_001472767 |
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| Protein GI | 157374167 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0006] Xaa-Pro aminopeptidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000479097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.388607 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTTAG GTGTGGGTGG TTCAACCGTA GAACAAGAGC TGGCGAAATT GACCGATATG
ACCGAAGGCA CTCAGCCTAT CAGTCATGGC GAATATCAAG CTCGCATCGA GAAGGCTCAG
GAGCTGATGA CGTCTCAAGA TATTGAGGCT ATCTATGTCG ATGCCGGTAC CAACTTATAC
TATTTTACCG GTACACGCTG GTATGCGAGT GAGCGTATGG TTGGAGCCAT CATTCCGGCT
AAGGGCGCGG TCGAATATAT CGCGCCGGCA TTTGAGGTCG ATACACTCGA AGGCTTTATG
GTTATCGAAG GCAGGGTCAA CACCTGGCAA GAGGATGAGA GTCCTTATGA ATTGTTTGGT
TCTGTATTGA ACAGGATGGG GATCACGGCA GGTAACATAG GCATAGATGA GTCAGCAGCA
TTTTTCATCT TTGACGGCGT GCGTCAGGCA CACTCAAACT TCGAATACGT TAATGCTAAA
AGCGTTACCG CGACCTGCCG TATGATCAAG TCAGAGACTG AACTGAGTCT GCTTCAGCGT
GCGAAAGATA TGACGCTGGA GGTGCACAAG GCGGCGGCGC GTATTTTACA TGAAGGGATC
ACGGTTGCCG AAGTTGAGGC CTTTATTAAT GAGGCCCATA AGGCGGTAGG TATACCGTCC
GGTTCCTATT TCTGTATCGT TCTTTTCGGT GAAGACAGTG CTTATCCTCA TGGCGTTAAG
TCTCCTAAAG CTCTGGAGTT GAACGATACT GTCCTTATCG ATACCGGCTG TCAGCTACAG
GGCTATAACT CGGATATTAC CCGTACATTT GTGTTCGGAA CACCGAGTGA TCGTCAGCGT
GAACTTTGGC AATATGAGCA AGACGCGCAG ATCGCCGGAT TCGAAGCCGC CAGGATCGGA
GCCCCCTGTT CGAGTGTCGA CAAAGCCGCG AGGGATGTGC TCGTAGCCGC GGGATTTGGC
CCCGATTATG CTGTGCCGGG TCTGCCACAC CGTACCGGTC ATGGCATAGG CCTGGATATT
CATGAATGGC CATATCTCGT TCGGGGCGAT GAGACGCCGC TGGCCGCAGG CATGTGTTTC
AGCAATGAGC CTATGCTCTG TGTCCCTGGT GAGTTTGGTG TTCGTCATGA AGATCATTTC
TATATGACTG AGCAAGGCCC GGTGTGGTTC ACCAAGCCGG CACACTCTAT CGACGATCCA
TTTGGGTATG AGGCTTAA
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| Protein sequence | MTLGVGGSTV EQELAKLTDM TEGTQPISHG EYQARIEKAQ ELMTSQDIEA IYVDAGTNLY
YFTGTRWYAS ERMVGAIIPA KGAVEYIAPA FEVDTLEGFM VIEGRVNTWQ EDESPYELFG
SVLNRMGITA GNIGIDESAA FFIFDGVRQA HSNFEYVNAK SVTATCRMIK SETELSLLQR
AKDMTLEVHK AAARILHEGI TVAEVEAFIN EAHKAVGIPS GSYFCIVLFG EDSAYPHGVK
SPKALELNDT VLIDTGCQLQ GYNSDITRTF VFGTPSDRQR ELWQYEQDAQ IAGFEAARIG
APCSSVDKAA RDVLVAAGFG PDYAVPGLPH RTGHGIGLDI HEWPYLVRGD ETPLAAGMCF
SNEPMLCVPG EFGVRHEDHF YMTEQGPVWF TKPAHSIDDP FGYEA
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