| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1015 |
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| Symbol | |
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| ID | 5610368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1209257 |
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| End bp | 1210369 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931863 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_001472754 |
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| Protein GI | 157374154 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000271858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.473888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATTGTAT TTAGATATCT GATAAGAGAA GTTTTTAAGG CACAAATTGC GGTGCTTTTC
GTGCTTCTGG CTATTTTTAT TAGCCAACAC TTTGTTCGAG TGCTCGCAAA CGCTTCAGAC
GGTGAATTTC CAGCCTCTCT GGTCATGACC CTGTTGGGAC TCAACCTTCC CTATCTTGCG
GTCTTAGTCT TACCTTTAAG CTTATTCTTA GGAATATTAT TGGCTCATGG GCGTATGTAC
GCCGAAAGTG AGATGGTGGT ATTACACGGT GTCGGTGTGA GTGAATGGTA TATCACACGA
GTCACTCTCT TGCTGGCCGT GATAAATATG CTCTTCACCG GTTACCTGTC CGTTTTTGTG
ACGCCTTGGG CCGAAGAGAA ACAGAATCAG GTGCTGGAGT CGGCTCAGTC TGAAGCCGGG
CTTGCGGCAA TCACCCAGGG GCGTTTCCAG ACCAGCCCTA ACGGCAGAGC CGTATTGTTT
GTCGAGCGAA TCGACAGAGA TAATCAACTC GATAAAGTCT TCGTTGCTCA ACTTCCCGAC
CCCGAAGATG AGTCGGGGCA GAGTAATATT GTCATGGCTA AAGGTGGCAG TGTTGTCGAA
GACGGCTCCG GTGGACAACG CTTACAACTC AATGATGGTG TGCAGTATCA GGGGACGCCT
AAGAAGGTCG ATTTCCAGGT CGTTGAGTTT GGTGGCTACC AGATGCAGAT TAAGGAGCAA
GAAGTTGACG AGCGTCGACG CAAGCTTTCT GCACTGCCCA TCAAAGATCT GATGGCCTTA
GATGGCCCGG AGGCCACGGC CGAATTTCAT TGGCGATTAG CGATACCGCT GGCTATCCCC
TTAATGACAC TGATTGCCGT ACCTATGGCG CGGGTTAATG TTCGTCAGGG TAAATTTGCC
AAGATGTTCC CGGCCATCTT ACTCTACCTT GGCTATTTCG GCTTGATGAT AGCCGGACGA
AAAGCCTTAG AAGATGGTGT GGTGCCTGCC TACCTCGGCA TGTGGTGGAT ACATGCCTCG
GCCCTGTTCC TGGGGATATT GCTCTTGGGC AAGGAGCGGC CCTCGGGGGC GAAACTATCG
GGTATGTTTA AGCGTAAGAA GGTGGCTGCG TGA
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| Protein sequence | MIVFRYLIRE VFKAQIAVLF VLLAIFISQH FVRVLANASD GEFPASLVMT LLGLNLPYLA
VLVLPLSLFL GILLAHGRMY AESEMVVLHG VGVSEWYITR VTLLLAVINM LFTGYLSVFV
TPWAEEKQNQ VLESAQSEAG LAAITQGRFQ TSPNGRAVLF VERIDRDNQL DKVFVAQLPD
PEDESGQSNI VMAKGGSVVE DGSGGQRLQL NDGVQYQGTP KKVDFQVVEF GGYQMQIKEQ
EVDERRRKLS ALPIKDLMAL DGPEATAEFH WRLAIPLAIP LMTLIAVPMA RVNVRQGKFA
KMFPAILLYL GYFGLMIAGR KALEDGVVPA YLGMWWIHAS ALFLGILLLG KERPSGAKLS
GMFKRKKVAA
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