| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1009 |
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| Symbol | |
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| ID | 5609986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1199797 |
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| End bp | 1200267 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931857 |
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| Product | DNA polymerase III chi subunit, HolC |
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| Protein accession | YP_001472748 |
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| Protein GI | 157374148 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2927] DNA polymerase III, chi subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.153298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAGA CCCTATTTTA TCTTATGCCA ACTGAGCCTC GAAGCTCGGG AACGGCATTA
GAGCAGATGT ATCATCTGGC TTGTGAACTG GCTCAGCAGG CATTTATGCA GCAGCAACTG
GTTTATCTTC ACTGCCAGGA TAGAGAGCAG GCCTATGCCA TCGATGAACT TTTATGGCAG
TTTGAACCGC GCTCTTTCGT TCCCCATAAT TTGAAAGGGG AAGGACCCAC CACCGGTGCT
CCGGTTGAAA TCGGCTTCGA TAAGCTGGGT CCCAATAAAA ATCGTCATCT TCTGATTAAT
CTTGCAGACC AAGTCCCCTC ATTTGCGGTA AACTTTGGTC AGATTATCGA TTTCGTTGCC
AACGATACCA GCCATAAAGC GATCGCCCGC GATCGATATC GGCAGTATCG GAGCCTGGGA
GTTACATTGA ACACCCAGGA TTTAGCAAAA CAACCACTTA ATTTAGTTTG A
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| Protein sequence | MTQTLFYLMP TEPRSSGTAL EQMYHLACEL AQQAFMQQQL VYLHCQDREQ AYAIDELLWQ
FEPRSFVPHN LKGEGPTTGA PVEIGFDKLG PNKNRHLLIN LADQVPSFAV NFGQIIDFVA
NDTSHKAIAR DRYRQYRSLG VTLNTQDLAK QPLNLV
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