| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0999 |
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| Symbol | |
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| ID | 5610053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1182926 |
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| End bp | 1183537 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931847 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472738 |
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| Protein GI | 157374138 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1584] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGACGA AACTAGCTAA CCCAGCACCA TTAGGCCTTA TGGGCTTCGG TATGACTACC
GTACTATTAA ACATTCACAA TGCGGGTTTC TTCCCAATTG ATTCTATGAT CCTGGCAATG
GGAATTTTCT ACGGTGGCTT AAGCCAGGTA ATCGTTGGCT GCATGTGCTT TAAGCGTGGT
GATACATTTG GCACTACCGC TTTCACCTCA TATGGCTTGT TCTGGTTAAC ACTTGTTGGC
TTACTCGTAT TGCCTAAGAT GGGACTGGCA GCTGCAAGCC CAGCAGGTTT CATGGGCTGG
TATTTGACAC TATGGGGTAT CTTTACTGCG TTTATGTTTG TCGGCTCACT ACGTTACCCA
CGCGCCAAGC AGGTTGTATT TGGTTCATTA ACGATTTTGT TCTTTCTTTT GGCGGCCAGA
GATTTTACCG GCAGCGAGCT TATCGGTACT ATCGCCGGTT TCGAAGGTAT CTTCTGTGGT
GCAAGCGCTA TCTACTTCGC CATGGCACAG GTGTTGAATG CCGAATATGG CCGCACTATT
TTGCCTGTTG GTGAACTAGC GCCGAAGGCG GTTCAGCCTT TTCAAGCTGA AGCTCATCTA
AAAGTCGCTT AA
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| Protein sequence | MSTKLANPAP LGLMGFGMTT VLLNIHNAGF FPIDSMILAM GIFYGGLSQV IVGCMCFKRG
DTFGTTAFTS YGLFWLTLVG LLVLPKMGLA AASPAGFMGW YLTLWGIFTA FMFVGSLRYP
RAKQVVFGSL TILFFLLAAR DFTGSELIGT IAGFEGIFCG ASAIYFAMAQ VLNAEYGRTI
LPVGELAPKA VQPFQAEAHL KVA
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