| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0995 |
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| Symbol | |
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| ID | 5610216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1177229 |
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| End bp | 1177849 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931843 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472734 |
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| Protein GI | 157374134 |
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| COG category | [K] Transcription |
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| COG ID | [COG2345] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACCA GTGAAAAGAT CATGCAGCTA CTTAAAACTC AAGGCCCGCT TACCGCTAAG
GTGCTTGCCA CTGAGCTGTC TCTCACGACA ATGGGAGTGC GTCAGCATAT GCAAGCCTTG
GAGGAGGAAG GGGATATCTG CTTCGAGGAT AAAAAAGCCC CCCGGGGACG TCCTACCCGG
TACTGGTCTC TAACGCCAAA AAGCAACATT CACTTCTCCG ACCGCCACGA AGAACTCTCA
GTTCAACTGA TCGATTCTGT TATTACGGTA TTTGGCGATA GTGGATTGGA TAAGCTCATT
TCGCACCGAG AGCAAAGCTC CCTCGAGCTC TACCAACAGA GGTTAGCCGG TGAAGATACG
CTTAAGTCTA AGCTTCGAGC CTTGGCCGAA CTGAGATCGA TTGAGGGCTA TATGGCAACG
GTTAACGAAG CGGGGAATGA CTTTTGGCTA TTGGAAAATC ATTGTCCTAT CTGCGCCGCG
GCGAGTAAGT GCCTCAACTT CTGTCGCTCG GAGTTAAATC TGTTTCAAAT CTTGTTAAAG
GAGGAGGCAG AAGTTAGCCG TGAAGAGCAT ATTATCGAGG GTGCACGTCG CTGTGCTTAC
CGGATTACAC CGATTAACTA G
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| Protein sequence | MKTSEKIMQL LKTQGPLTAK VLATELSLTT MGVRQHMQAL EEEGDICFED KKAPRGRPTR
YWSLTPKSNI HFSDRHEELS VQLIDSVITV FGDSGLDKLI SHREQSSLEL YQQRLAGEDT
LKSKLRALAE LRSIEGYMAT VNEAGNDFWL LENHCPICAA ASKCLNFCRS ELNLFQILLK
EEAEVSREEH IIEGARRCAY RITPIN
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