| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0966 |
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| Symbol | |
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| ID | 5609916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1147724 |
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| End bp | 1149028 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931814 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_001472705 |
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| Protein GI | 157374105 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000138448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCCT GTAAACATTT TATTTTTGCT TTTCTTACCC TGGCAATGAG CCACACAGTT
CTAGCTAAAG TAGAGCCCCT GGACCGTGTT GCAGTTCAGA TAAACGAAGG TATTGTACTG
GAGAGTGAGA TAGCCGGTAT GCTACAGACG GTAAAAGCCA ATGCCAGCTC AGCAGAACAG
GCTTTACCAT CAGATCAAGC GCTTAGAACC CAGGTTATTG AACGTTTGAT CATGACCCGA
TTACAGATGC AAATGGCTGA CAGAATTGGT TTGCATATCG GAGATCTCCA ACTGGATCAA
ACCATCAGTA ATATTGCCAA AGAGCAGAAT CTTACTGTTG ATCAGATGAG AGCGAAAATT
GGTGAAGAGG GAATGAGCTG GAGTCAATAC CGTGAACAGC TTCGTGAAGA GATCACCTTA
GGTGAAATCC AACGTATTCA GGTTCAACGC CGTATTCAGG TCTCACCTCA AGAGATCAAT
AACTTAGTTA AGCTTATTGA AGAGCAAGGA CTGCAGCAAG TTGAGTTCCA AATCGGACAT
ATACTGATTG AAGTACCAAG CAGCCCGAGC AGTGAAGCAC TGCAAAAAGC GAGTGAACGC
GCTAATACTG TGCTGAAACG TATCCAAGAT GGCGATGATT TCCGCCGTAC TGCGATTGCC
GCATCGGCAG GTCCAAAGGC CCTCGAGGGT GGTGTTTGGG ACTACATGAA CGTCAACGAA
ATGCCAACGC TTTTTGCCGA GGTATTGAGT GGTGCTAAGA CAGGTGATGT TATTGGTCCG
ATCCGTAGCG GTGCAGGCTT TCATATCATC AAGGTGCTCG ATGCCCGCGG CCTGCAAACT
AAAGAGGTTG ATGAAGTCAG CTCAAGACAT ATTCTAATTA AGCCCTCTCC AATCCTATCG
GAAGAGAGAG CTAAGGCGAT GCTTGATAAG TTCGTAGAGC AGGTACGTGC CGGCGATGCA
GATTTTGCAG CCCTTGCCCG TCAATACTCT GAAGATCCAG GTTCAGGGGC TAAAGGTGGC
GAACTGGGCT GGGCCGATCC TTCAGTTTAT GTTCCTGCAT TCGCCCAAAC CTTGAATGCA
TTAGAAATTG GCGAGATCAG TGAGCCATTC CGTTCTAGTC ACGGCTGGCA TATAGTACAA
CTAGAAGAGC GCCGAAAAAC GGATGCTACA GACAAATTTA ATACTAATCG GGCGCACCAA
CTTATCTTCC GTCGAAAGTT TAATGAAGAG CTACAAAACT GGCTGGATGA GATGAGATCT
GAGGCGTATA TCGAAGTTTT CGATGCTGAT TTCAATCGAG GTTAA
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| Protein sequence | MKPCKHFIFA FLTLAMSHTV LAKVEPLDRV AVQINEGIVL ESEIAGMLQT VKANASSAEQ
ALPSDQALRT QVIERLIMTR LQMQMADRIG LHIGDLQLDQ TISNIAKEQN LTVDQMRAKI
GEEGMSWSQY REQLREEITL GEIQRIQVQR RIQVSPQEIN NLVKLIEEQG LQQVEFQIGH
ILIEVPSSPS SEALQKASER ANTVLKRIQD GDDFRRTAIA ASAGPKALEG GVWDYMNVNE
MPTLFAEVLS GAKTGDVIGP IRSGAGFHII KVLDARGLQT KEVDEVSSRH ILIKPSPILS
EERAKAMLDK FVEQVRAGDA DFAALARQYS EDPGSGAKGG ELGWADPSVY VPAFAQTLNA
LEIGEISEPF RSSHGWHIVQ LEERRKTDAT DKFNTNRAHQ LIFRRKFNEE LQNWLDEMRS
EAYIEVFDAD FNRG
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