| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0964 |
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| Symbol | ksgA |
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| ID | 5609914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1145915 |
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| End bp | 1146718 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931812 |
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| Product | dimethyladenosine transferase |
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| Protein accession | YP_001472703 |
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| Protein GI | 157374103 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
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| TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.337956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA AAGTACATTT AGGCCATACA GCCAGAAAAC GTTTCGGACA AAACTTCCTG
ACCGACGGTA ATGTTATCAA CCGCATCGTG GGTGCGATTG CACCCGATAA TGATCATGTT
ATGGTTGAAA TTGGTCCGGG TCTCGGCGCC CTGACCGAAC CGGTAGCCAA TGGTATCGAT
AAGTTAACGG TAGTCGAGCT GGATAAAGAT CTTGTTGAGC GACTCAAAGA GCACCCAACA
CTGAAGCACA AGTTGGACAT CCATCAAGGT GATGCACTGA AATTTGATTT CAGTCAGCTC
GTGGAAGAAG GCAGGCAGAT GAAGGTATTT GGTAACTTAC CTTATAACAT CTCTACGCCA
CTCATGTTTC ACCTGTTTGA GTTTGCAGAG CAGATTGAAA ACATGCATTT CATGTTGCAA
AAAGAGGTCG TTCTTAGACT ATCAGCCAGC CCGGGAACTA AAGCTTATGG ACGCTTGACT
GTGATGGCGC AATATCACTG CCAAGTCATG CCAGTGCTTG AAGTGCCACC ACATAGCTTC
ACGCCGGCGC CTAAAGTCGA CTCAGCTGTG GTTCGCCTCG TACCTTACAA GACAAAGCCT
TGGCCATGTA AAGATGTCGA TCAGCTCAGA CACCTGACCA CCACGGCATT TAATATGCGC
CGGAAAACGC TGCGCAATAA CCTCAAGCAT ATGATCAGCG ATGAAGAGTT TGCTGCTCTT
GGGATCGACG CTACGCTCAG ACCTGAGCAG ATCACTGTCC AGCAATATGT CGCCATGGCT
AACTTGGTTA TCGACAAGAA GTAA
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| Protein sequence | MSNKVHLGHT ARKRFGQNFL TDGNVINRIV GAIAPDNDHV MVEIGPGLGA LTEPVANGID
KLTVVELDKD LVERLKEHPT LKHKLDIHQG DALKFDFSQL VEEGRQMKVF GNLPYNISTP
LMFHLFEFAE QIENMHFMLQ KEVVLRLSAS PGTKAYGRLT VMAQYHCQVM PVLEVPPHSF
TPAPKVDSAV VRLVPYKTKP WPCKDVDQLR HLTTTAFNMR RKTLRNNLKH MISDEEFAAL
GIDATLRPEQ ITVQQYVAMA NLVIDKK
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