| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0963 |
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| Symbol | apaG |
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| ID | 5609913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1145440 |
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| End bp | 1145820 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931811 |
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| Product | ApaG |
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| Protein accession | YP_001472702 |
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| Protein GI | 157374102 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2967] Uncharacterized protein affecting Mg2+/Co2+ transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTCAC TAGAAGACTC CATCAAGGTC GAAGTAAAAA CTGAATATAT TGAAGGTCAA
TCTTCCCCTA CCGAAGAAAG GTACTTGTTC AGATATACCA TCACTATCGT TAATCTCGGT
GAAAAAGCGG TGACACTGAA GAGCCGTTAC TGGTCAATTA CCGATGCGAA TAACCATAAT
AGCGAAGTGC GGGGAGAAGG CGTGGTTGGT GAGACGCCAA CAATAGAACC TGACAGTGCA
TATCAATATA CCAGTGGCAC AGTACTGGAG ACTCCTTTGG GGGTCATGCA AGGCAGCTAC
ACTATGATCA CCGGCGAAGG AGAGAGCTTT AAGGCGCAAA TCCCTCCTTT CAGACTCGCA
GTCCCTGGCA TGCTTCACTG A
|
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| Protein sequence | MTSLEDSIKV EVKTEYIEGQ SSPTEERYLF RYTITIVNLG EKAVTLKSRY WSITDANNHN
SEVRGEGVVG ETPTIEPDSA YQYTSGTVLE TPLGVMQGSY TMITGEGESF KAQIPPFRLA
VPGMLH
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