| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0955 |
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| Symbol | rpmA |
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| ID | 5612546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1138453 |
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| End bp | 1138707 |
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| Gene Length | 255 bp |
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| Protein Length | 84 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931803 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001472694 |
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| Protein GI | 157374094 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.455715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACATA AAAAAGCTGG CGGTTCTACT CGTAACGGCC GCGATTCAGA AAGTAAACGT
CTTGGTGTAA AGCGCTTTGG TGGCGAATCA GTTCTTGCTG GTAACATCAT TGTTCGTCAA
CGTGGTACTA AGTTCCACGC TGGTGTAAAC GTAGGTATTG GTCGTGACCA TACTCTATTC
GCTTTGACTG ACGGTAAAGT TAAGTTCGAA GTTAAAGGTC CTAAGAACCG CAAGTTCATT
AGCATCGAAG GCTAA
|
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| Protein sequence | MAHKKAGGST RNGRDSESKR LGVKRFGGES VLAGNIIVRQ RGTKFHAGVN VGIGRDHTLF
ALTDGKVKFE VKGPKNRKFI SIEG
|
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