| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0949 |
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| Symbol | |
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| ID | 5610880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1133279 |
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| End bp | 1134217 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931797 |
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| Product | Dyp-type peroxidase family protein |
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| Protein accession | YP_001472688 |
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| Protein GI | 157374088 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2837] Predicted iron-dependent peroxidase |
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| TIGRFAM ID | [TIGR01413] Dyp-type peroxidase family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAATC AGGCTATGCC ACGTGAACAG TTGGGAGTGT GTGCAGAAGG TAACTTGCAC
AGTGTGTATT TGATGTTCAA TGCCAATGAA GGGGGAGAAT CTCAATTACG GCCTTGTATC
GCTAATGTGG CTCAATATAT CTACGAGCTT ACCGATCAAT ATGCCGATAG TGCCTTTAAT
GGTTTTGTGG CCATTGGCGC GAATTATTGG GATAGCCTAT ATCCATCGGC TCGCCCTACA
GCATTAAAGC CTTTTCCTGC CATGAACGCA GATACTCGTG ATGCCCCAGC TTTGGAGTAT
GACCTTTTCG TTCAAATTCG TTGTGACCGA TTCGATATAC TTCACCTGGT TGCTAATGAA
GTTTGCCAAA TGTTTGAAGG CCTGGTTGAA CTTATCGAAG AAGAGCGTGG CTTCCGGTTT
ATGGATAACC GAGACCTGAC AGGTTTTGTC GATGGAACGG AGAATCCCAA AGGTCGTAAC
CGTCAAGAGG TGGCACTCGT CGGAATTGAA GATGAGGCGT TTAAGGGCGG CAGTTATGTC
CATGTGCAGA AGTTCGCTCA TAACTTGAGT AAGTGGAACC GATTGCCGCA GAAAAAGCAG
GAAGATATTG TCGGCAGAAC CAAATTAGAT AATATTGAGT ATGCCTCAGA GGACAAGCCA
TTAACCAGTC ATATTAAGCG TGTTAATTTA AAAGACGCCG ATGGTAAGTC AATGGAGATA
TTAAGGCAGA GCATGCCTTA CGGAACGGTA AAAGAGCAAG GTCTGATGTT TATCTCTACT
TGCCGTAACT CAGTAAACTT TGAACATATG CTTAAGAGTA TGGTTCACGG CGACGGCCAC
GGAAATCATG ATCATCTGCT GCACTTTACT CAGGCTCTGA CCGGCTCCTC TTTCTTCGCT
CCTTCGCTCG ACTTTCTGGA AAATCAGGCT GGCGAATAA
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| Protein sequence | MDNQAMPREQ LGVCAEGNLH SVYLMFNANE GGESQLRPCI ANVAQYIYEL TDQYADSAFN
GFVAIGANYW DSLYPSARPT ALKPFPAMNA DTRDAPALEY DLFVQIRCDR FDILHLVANE
VCQMFEGLVE LIEEERGFRF MDNRDLTGFV DGTENPKGRN RQEVALVGIE DEAFKGGSYV
HVQKFAHNLS KWNRLPQKKQ EDIVGRTKLD NIEYASEDKP LTSHIKRVNL KDADGKSMEI
LRQSMPYGTV KEQGLMFIST CRNSVNFEHM LKSMVHGDGH GNHDHLLHFT QALTGSSFFA
PSLDFLENQA GE
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