Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0873 |
Symbol | |
ID | 5611447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 1038223 |
End bp | 1039374 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640931721 |
Product | S-adenosylmethionine synthetase |
Protein accession | YP_001472612 |
Protein GI | 157374012 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0192] S-adenosylmethionine synthetase |
TIGRFAM ID | [TIGR01034] S-adenosylmethionine synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAGC ACCTGTTTAC CTCTGAGTCG GTCTCAGAAG GTCATCCTGA TAAAATCGCC GATCAGATTT CTGATGCGGT ACTAGACGCA ATCCTAGAGC AAGATCCAAA GGCTCGTGTT GCGTGTGAAA CATACGTAAA GACCGGCATG GTCATGGTTG GTGGTGAAGT CACTACTTCA GCCTGGGTTG ATATCGAAGA GATCACCCGT AAGACGGTTC GCGAAATTGG CTACACTCAC TCAGACATGG GCTTCGATGC CGATTCTTGT GCTGTATTAA ATGCCATTGG TAAGCAATCG CCTGACATCA ACCAAGGTGT TGATCGCGCA GATCCTAAAG AACAAGGTGC CGGTGACCAG GGTCTAATGT TTGGTTATGC CAACAATGAG ACTGAGCTGC TAATGCCTGC CCCTATCACC TATGCTCACG CATTGGTTAA ACGTCAGTCT GAAGTTCGTA AAGCTAAGAC ACTGCCTTGG TTGCGCCCCG ATGCAAAAAG CCAGGTAACG TTTGCCTACG AAGACCACAA GATTGTTGGC ATCGACGCTA TCGTACTGTC GACTCAACAT TGTGACAGTG TTAGCCAAGC CGATCTGATC GAAGGCGTGA TGGAAACTAT CATCAAGCCA GTTCTTCCGG CGCAATGGTT GAACAAAGAT ACTAAGTACT TTATCAACCC TACCGGTCGT TTCGTTATCG GCGGTCCTAT GGGTGATTGT GGTCTTACGG GTCGTAAGAT TATCGTTGAT ACCTACGGCG GCATGGCTCG TCACGGTGGC GGCGCATTCT CTGGTAAAGA TCCTTCTAAA GTTGACCGTA GTGCCGCGTA CGCAGCCCGT TATGTAGCGA AGAACATCGT TGCTGCCGGC CTTGCCGATC GTTGTGAACT ACAGGTCTCT TACGCTATCG GCGTAGCTGA GCCGACTTCT ATCAGTATCG AAACATTCGG TACCGGCAAA GTTTCTGAAG AGGCGCTAAT CGCTCTCGTT CGTCAGCATT TCGACCTGCG CCCTTATGGC CTGACTGAGA TGTTAGATTT GGCTCGTCCT ATCTACCAGT CAACGGCAGC ATACGGTCAC TTCGGTCGCA ATGAGTTCCC GTGGGAACGC ACCGATAAAG CCGAAGCCCT TAGAGCCGAT GCTAAGCTCT AA
|
Protein sequence | MAKHLFTSES VSEGHPDKIA DQISDAVLDA ILEQDPKARV ACETYVKTGM VMVGGEVTTS AWVDIEEITR KTVREIGYTH SDMGFDADSC AVLNAIGKQS PDINQGVDRA DPKEQGAGDQ GLMFGYANNE TELLMPAPIT YAHALVKRQS EVRKAKTLPW LRPDAKSQVT FAYEDHKIVG IDAIVLSTQH CDSVSQADLI EGVMETIIKP VLPAQWLNKD TKYFINPTGR FVIGGPMGDC GLTGRKIIVD TYGGMARHGG GAFSGKDPSK VDRSAAYAAR YVAKNIVAAG LADRCELQVS YAIGVAEPTS ISIETFGTGK VSEEALIALV RQHFDLRPYG LTEMLDLARP IYQSTAAYGH FGRNEFPWER TDKAEALRAD AKL
|
| |