Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0807 |
Symbol | |
ID | 5611396 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 955056 |
End bp | 957539 |
Gene Length | 2484 bp |
Protein Length | 827 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640931655 |
Product | peptidase S9 prolyl oligopeptidase |
Protein accession | YP_001472546 |
Protein GI | 157373946 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000293911 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00280594 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAGGAC TGATACGTAA TTCTGGTCTT AGTTTAATTG CGATAGCTAT ATTGGGTGGC TGTGCGAGCA GTGAAAATCA TTCAGCTGTA CAAAAGCAAG ATATGCATAC TAAGGTTCAA GCCGAACTGA CTGCACCTCC TCAGGTTGGA GAAAACTTGA CCCTGAATCA GATTATGGCT AACCCCGACT GGATGGGAGT ACTGGCTAAG GGCGCGTATT GGGGAGATGA CAGCCAGACT ATCTTCTTTA CGAGGCAAGC GCATGGCGCA CCAATAAAAG AATATTATCG CCAGGATGTG GCTGCCGCTC AGGCGACACA GCTAAATTTG AACCAATTGC ATCATGCAGA TCAAGAGTCC GGAGTCTTTG ACAAGAACAG AAGCCGAAAA GCCTACATAT ACCAGGGTAA CCTCTTCGTA AAAGAGTTAG CTACGGGGCA GATTATTCAG CTTACGAGGC AGAATGACAA TGTAGATGGA GTACGATTTT TAACTAATGG TGATATTGCC TTCTGGCAGG GAGACACCGT TTTTCGTATT CATCAAGACT CGGGTATGTT TGAGCAACTG GCAAGCATCA AGATGGCTGT TAAGCCTAAA GGCGTAGAGG CTCCGACCAG CTATATCGCC AAACAGCAAC ATAGATTGAT CCAGTATGTT GCGATGCAGC AAGAGAATGC TAAGAAGAGA GAAGAGCATC AGAATGAACT TAGCCAGTTA GATCCAACGC TTGCCGCTAA AGTTTGGTAC TTGGGGGATA AAGAGACGGT GTCAGACTTG AGCCTCTCAC CCGACGGTCG TTACCTGCTC TTGTCATTAA TTGATAAGGA TTACAGTTGG CGAAGTGAAC ATGACATCAT GCCCAATTAT CTGGGGAAAG ATGGTTATGT CGATGCCGTC CCGGCAAGGG CTCGTGTTGC CGAAGATAAC CCACCCGGGG AGCGCTTAGT ATTACTCGAC CTTCAAACTC ATAGTTTAAA GGATATCACT ATCGAAGGTC TTGAAGGTTT CGATGAAGAT GTCCTGTCTG GGGTTAAGTC TGAAAATGCC AAGTTAGCGG GCGACACTTA TAAGAGTGAA AAGTCACCTC GTAAGATCCA ACTGATGCAG GATTGGGGAT GGTCTCAAAG TGCCGTTCAA TGGCAGGAGT CTGCCAATCG GGTCGCTATC ATGCTCGAAG CTGTCGACAA TAAAGATCGC TGGATAGCGA CACTGGATCT AGAGAAGGGA TCCATGAAGA CCCAACACAG GCTGCATGAT GAAGCTTGGG TTAACTATAA CTTCAATCAG TTTGGTTGGT TGCCTGAAAC TAATAACCTC TATTATCTCT CCGAGGAAAC CGGCTATTCA CATATCTATG TTAAGCAAGC GGGTAAACAA GCCGAGCCAC TCACACAGGG TAAATTCGTC GTAAGTGACA TCACCTTAGG TCCTAAGGCT CAATTTATCT ACTACAAGGC TAATAAGCAG CATCCTGGTA TAGATAACGT TTATCGGGTC TCTGTTAAAA CAGGTAAAGA TGAGCAATTA ACCCAGTGGG ATGGACAACT CGATTATACT TTGAGCCCTG ATGGAAAAAG TCTGCTACTC AACGCGTCTC GTCGAACTGA GCCTGGAGAG TTATTTATTC TGCCAATCGG TGGTGCTATT AAGCAACTGA CTTCATACAC CAGTGACGCC TTTAAGAAGT ATCAGTGGCA AGCTCCTAAA GTGGTTGCTG TACCTTCGAG CCATGGCGCC GAGGATATTT ATGCCAGAGT CTACCTCCCG CAAGGGTATG ATAAGAGTCG AGGTGAGAAG TATCCTGCGG TGATCTTCAA CCATGGTGCA GGCTATCTGC AAAATGCTCA TTACGGCTTC TCTGGGTACT TCAGAGAGTT TATGTTCCAT AACCTGTTAA CTCAGCAAGG TTACGTGGTT CTGGACATGG ATTATCGCGG CTCTAAAGGC TACGGACGTG ACTGGCGTAC AGCAGTGTAT CGCAATATGG GACACCCTGA AGTTGAGGAT TTGAAGGATG GTGTGAGCTG GATGGCCACT CATACTAATG TTGATGCAAG TAAAGTCGGC ACCTATGGCG GTTCCTATGG GGGCTTTTTG ACCTTTATGG CACTGTTTAC AGAGCCTGAG CTTTTCCAGG CTGGTGCCGC ACTGCGTCCT GTGACGGATT GGGCACACTA CAATGCACCA TACACCTCAA ACATACTTAA CACTCCTGAT GTAGATCCTA TTGCCTATGA GCGAAGCTCA CCCATAGAGC ATGCCCAGGG GCTGCAAAAA CCACTACTCA TCATGAGTGG CGTATTAGAT GACAATGTCT TCTTCCAGGA TAGTGTTCGT CTGGTACAGC GCTTAATTGA GTTGGAGAAG CCGATGTTCG AGACAGCAAT TTACCCGGTA GAGCCTCACG GGTTTAAGCA ACCTTCGAGT TGGCTAGATG AATACCGTCG AATCTATAAA CTATTTGAGC AAGAGCTGAA ATAA
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Protein sequence | MTGLIRNSGL SLIAIAILGG CASSENHSAV QKQDMHTKVQ AELTAPPQVG ENLTLNQIMA NPDWMGVLAK GAYWGDDSQT IFFTRQAHGA PIKEYYRQDV AAAQATQLNL NQLHHADQES GVFDKNRSRK AYIYQGNLFV KELATGQIIQ LTRQNDNVDG VRFLTNGDIA FWQGDTVFRI HQDSGMFEQL ASIKMAVKPK GVEAPTSYIA KQQHRLIQYV AMQQENAKKR EEHQNELSQL DPTLAAKVWY LGDKETVSDL SLSPDGRYLL LSLIDKDYSW RSEHDIMPNY LGKDGYVDAV PARARVAEDN PPGERLVLLD LQTHSLKDIT IEGLEGFDED VLSGVKSENA KLAGDTYKSE KSPRKIQLMQ DWGWSQSAVQ WQESANRVAI MLEAVDNKDR WIATLDLEKG SMKTQHRLHD EAWVNYNFNQ FGWLPETNNL YYLSEETGYS HIYVKQAGKQ AEPLTQGKFV VSDITLGPKA QFIYYKANKQ HPGIDNVYRV SVKTGKDEQL TQWDGQLDYT LSPDGKSLLL NASRRTEPGE LFILPIGGAI KQLTSYTSDA FKKYQWQAPK VVAVPSSHGA EDIYARVYLP QGYDKSRGEK YPAVIFNHGA GYLQNAHYGF SGYFREFMFH NLLTQQGYVV LDMDYRGSKG YGRDWRTAVY RNMGHPEVED LKDGVSWMAT HTNVDASKVG TYGGSYGGFL TFMALFTEPE LFQAGAALRP VTDWAHYNAP YTSNILNTPD VDPIAYERSS PIEHAQGLQK PLLIMSGVLD DNVFFQDSVR LVQRLIELEK PMFETAIYPV EPHGFKQPSS WLDEYRRIYK LFEQELK
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