| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0802 |
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| Symbol | |
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| ID | 5611529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 950928 |
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| End bp | 952142 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931650 |
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| Product | cytochrome b/b6 domain-containing protein |
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| Protein accession | YP_001472541 |
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| Protein GI | 157373941 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1290] Cytochrome b subunit of the bc complex |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000623655 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00979374 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTTAAGA ATATTGTTGA TTGGATTGAT GCTCGCATTC CTATGACGGC GACCTATAAC
CGTCATATTG GTCACTATGC GACGCCGACT AACTTTAACT TTTGGTATTT CTTTGGCTCA
TTAGCTATGT TGGTACTGGT TAACCAGTTA CTAACAGGTA TCTGGCTGAC AATGAACTAT
GTGCCAACGG CCGAAGGTGC GTTTGCATCG ATTGAATATA TTATGCGTGA TGTTGAGTAC
GGTTGGTTGT TGCGTTATAT GCACTCTACC GGTGCCTCGG CATTTTTTGT CGTTATCTAT
CTACACATGT TCCGTGGTTT AATCTACGGA TCTTACCAGA AGCCCAGAGA GCTACTCTGG
CTATTCGGTA TGCTTATCTT CCTAGTGTTG ATGGCGGAAG CCTTTATGGG TTACCTGCTA
CCTTGGGGAC AGATGTCTTA CTGGGGCGCA CAGGTCATTA TCTCACTCTT TGGTGCTATA
CCTGTCATAG GTGATGATTT AACCTTGTGG ATCCGTGGTG ACTTCGTCGT CTCCGGTGCG
ACACTGAACC GTTTCTTTGC CTTGCACGTC ATCGCATTGC CGCTGGTTCT GGTTGTATTG
GTCTTCTTAC ACTTAATCGC ATTACATGAA GTGGGTTCAA ACAACCCTGA CGGTATCGAG
ATTAAGAAAA ATAAAGACGA GAATGGCTGG CCTAAAGATG GTATTCCATT CCATCCTTAC
TACACAGTTA AAGATATCAT GGGTGTCGCA GGCTTCCTGA TTGTCTTCTG TTATGTCCTG
TTCTTTATGC CGGAAGGTGG TGGATACTTC CTTGAGAAGC CGAACTTTGA AGCGGCCAAT
CCAATGAAGA CGCCTGAGCA TATTGCACCA GTCTGGTACT TCACACCTTT CTACGCCATT
TTGCGTGCGA TCCCTGATAA GTTGTTAGGT GTCGTAGGTA TGGGACTTGC GATTGCAGTT
CTGTTTGTAC TGCCCTGGTT AGACCGCTGT AAGGTTAAGT CCGTTCGTTA CCGTAGCATG
ATCCATAAGT TGAATATCGG TCAATTTGCC GTGTCATTTG TTGTCTTGGG TTATTTAGGT
GCTGTCCCTG CGACACCTGC ACTGACAATC GCTGCGCGTA TCTTTACTCT GACTTACTTC
GGTTTCTTCT TACTGCTTTG GATTTACAGT AAGAACGAGA AGACTAAGCC TGTTCCAGAG
AGGTTGACTC ACTAA
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| Protein sequence | MVKNIVDWID ARIPMTATYN RHIGHYATPT NFNFWYFFGS LAMLVLVNQL LTGIWLTMNY
VPTAEGAFAS IEYIMRDVEY GWLLRYMHST GASAFFVVIY LHMFRGLIYG SYQKPRELLW
LFGMLIFLVL MAEAFMGYLL PWGQMSYWGA QVIISLFGAI PVIGDDLTLW IRGDFVVSGA
TLNRFFALHV IALPLVLVVL VFLHLIALHE VGSNNPDGIE IKKNKDENGW PKDGIPFHPY
YTVKDIMGVA GFLIVFCYVL FFMPEGGGYF LEKPNFEAAN PMKTPEHIAP VWYFTPFYAI
LRAIPDKLLG VVGMGLAIAV LFVLPWLDRC KVKSVRYRSM IHKLNIGQFA VSFVVLGYLG
AVPATPALTI AARIFTLTYF GFFLLLWIYS KNEKTKPVPE RLTH
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