| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0801 |
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| Symbol | |
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| ID | 5611528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 950338 |
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| End bp | 950928 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931649 |
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| Product | ubiquinol--cytochrome-c reductase |
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| Protein accession | YP_001472540 |
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| Protein GI | 157373940 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0723] Rieske Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000144242 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00783232 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAATG CGCCAGTCGA TACCGGACGT CGCAGATTTC TGACCGCAGC CACTGCCGTA
GTAGGTGGTG TAGGTGCCGT CGCTGTAGCG GTTCCTTTTA TAAAGTCATG GAATCCGAGT
GCCAAAGCGA AAGCTGCAGG TGCGCCGGTT GAAGTAAATA TTAGTAAAGT AGAGCCGGGT
CAATTGATCC GTGTAGAATG GCGTGGAAAG CCTGTATGGG TTGTACGTCG TACTGAAGAG
ATCCTGAAAA ATCTCGCCAC TCTTGATGAT CAATTACGCG ATCCAGCATC AGCAGAAGAG
CAACAGCCTG CTTATGCACA AAACGCTGTT CGCTCTATCA ATCCTGAGTA CTTTATTGCC
GTAGGTTTGT GTACTCACTT AGGTTGTTCT CCTACCTATC TGCCTGACAC CTTTGGTGAG
CAGGTTGAGG GTGTGCCTTC CGGTTTCTTC TGCCCATGTC ATGGTTCCAA GTTTGATATG
GCCGGTCGAG TATTCCAAGG GGTTCCGGCA CCATTGAACT TAGTTGTTCC ACCTCACCAG
TATATCGACG ATGGCAATGT CATCATCGGT GTTGATCAGG GAGCAGTCTA A
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| Protein sequence | MSNAPVDTGR RRFLTAATAV VGGVGAVAVA VPFIKSWNPS AKAKAAGAPV EVNISKVEPG
QLIRVEWRGK PVWVVRRTEE ILKNLATLDD QLRDPASAEE QQPAYAQNAV RSINPEYFIA
VGLCTHLGCS PTYLPDTFGE QVEGVPSGFF CPCHGSKFDM AGRVFQGVPA PLNLVVPPHQ
YIDDGNVIIG VDQGAV
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