| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0785 |
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| Symbol | |
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| ID | 5609893 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 930068 |
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| End bp | 930763 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931629 |
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| Product | glycerophosphoryl diester phosphodiesterase |
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| Protein accession | YP_001472524 |
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| Protein GI | 157373924 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000197487 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTATTT TTGCACATCG GGGGGCAAGC GGTTATGCCC CGGAAAATAC GCTGGCAGCA
ATGAAAAAAG CTATCGAGCT TGGGGCCAGA GCGGTAGAGA TTGATATTCA TAGCGTCGAG
GGTGAACTCT ATGTCTACCA CGATAGAAGG CTTGATCATA AGAGTAGTGG AACGGGACTC
ATCAGTGACG TTAGTCGCGA GTACCTGAAA ACACTCTTTG TAGATAGTGA ACCAATCCCG
ACGCTTTGGG AGGTGATGAC CTATCTGAGT AAGCAAAACT GTCTCGTCAA TATCGAATTA
AAGGGGATGA CATGCCTGAG CCCCTTTATT GCCCTGTACC CCAAACTGAT TAAAGAGTTG
GGATTCCGGG CCGACCAATT ACTGATCTCA TCCTTTCACC ATGGATTTCT ACAGGAGTTT
CGCCGTTCGT ATCCACTGGC ATGTATCGCC CCGCTGTTAG AGGGGGTTCT CCTCAATACT
ACCGATATAG CAACACAGCT CGATGCCTAT TCGATCCATT TAAGCCTGAG TTTCATTACC
TCCGAGTTAG TCGATGATGC TCATTCGAAA GGGTTAAAGG TGTTCGTGTA TACCGTCGAT
CATCCCGAAG ATATTCATCA GCTAAATAAA ATGGGGGTAG ATGGAATATT TACCAATTAT
CCGGATAAGG CGACACAAAC ACTGGCACAG GCTTAG
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| Protein sequence | MIIFAHRGAS GYAPENTLAA MKKAIELGAR AVEIDIHSVE GELYVYHDRR LDHKSSGTGL
ISDVSREYLK TLFVDSEPIP TLWEVMTYLS KQNCLVNIEL KGMTCLSPFI ALYPKLIKEL
GFRADQLLIS SFHHGFLQEF RRSYPLACIA PLLEGVLLNT TDIATQLDAY SIHLSLSFIT
SELVDDAHSK GLKVFVYTVD HPEDIHQLNK MGVDGIFTNY PDKATQTLAQ A
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