| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0775 |
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| Symbol | |
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| ID | 5614048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 919626 |
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| End bp | 920240 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931619 |
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| Product | ADP-ribose diphosphatase |
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| Protein accession | YP_001472514 |
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| Protein GI | 157373914 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
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| TIGRFAM ID | [TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000156265 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000726693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAAACAAA AATATAGCCG TCAGGATGTC GAATTGTTGG AAAAGAGGAC TCTCTTTAAA
GGTTTCTTTA CCTTGGATGA ATACCGGTTC AAGCATCGGT TATTCGATGG TGGCTGGAGC
GGTGAGATTG TCCGGGAAGT GTTTGAGAGG GGAGATGCTG TTATTGTGTT GCCCTATGAT
CCCATCACAG ATCAGGTCAT TTTAATCGAA CAGATAAGGA TCCCTGCATT TCAATCGGCC
CAGACTCCAT GGTTACTGGA GTTGGTTGCA GGCATGATTG AACCTGGGGA GTCCTCCTTA
AATGTGGCAT CAAGAGAGCT TAAAGAGGAA GCCGGGATAA GAGCTAAGAG GATTGAGAAG
ATCGCGAACT ATTTTTCAAG CCCTGGTGGT TCAAGCGAGA AATATGATTT TTTCTGGGCT
GAAGTTGATG CAAGCCAGGC GAAGGGCGTG CACGGGCTGA GTGAAGAGCA TGAGGATATA
CAAGTTCATG TCATGGGGCG TGAGGAAGCA TTTACTTTAG TGAAAGATGG TATAATCAAT
AATGCGTCTA CCGTTATTGG ACTGCAGTGG CTTGAGCTGA ACTATAAAAC ACTAACTTTA
AGTCATAAGT CGTAA
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| Protein sequence | MKQKYSRQDV ELLEKRTLFK GFFTLDEYRF KHRLFDGGWS GEIVREVFER GDAVIVLPYD
PITDQVILIE QIRIPAFQSA QTPWLLELVA GMIEPGESSL NVASRELKEE AGIRAKRIEK
IANYFSSPGG SSEKYDFFWA EVDASQAKGV HGLSEEHEDI QVHVMGREEA FTLVKDGIIN
NASTVIGLQW LELNYKTLTL SHKS
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