Gene Ssed_0769 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0769 
Symbol 
ID5611279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp914407 
End bp914760 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content44% 
IMG OID640931613 
Producthypothetical protein 
Protein accessionYP_001472508 
Protein GI157373908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000051793 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGAAAAA TTTTGGATCT CTTCATTGGG ATCGGTATCG CCATTTTGGC AACAACGCTT 
TTAATTGCGG CGGTACAAAC CTGGGGAACG ACTCAATTCC TGACCGGAAC CTTGTTGAGC
GTTGAACCAC TATTTTTGAT GGATATGAGT GTATGGGCAG TGGTCCTTAC CTTGGGAATC
GTTTTACTCC TTATACTCTG GTTAACGATA GCATTTAGTT TTCTGGCGTT GGTTTCCGGG
TTATGTATTA CCTGTGCCTT AATTATGGTA TTTGCAGGGT TCTCTCTTTT TTGGCCTGTA
TTACTGCTTA TTCTTGCAGG ATGGGGCGTA GGTCAAGCTA GCCAAGCTGA CTAG
 
Protein sequence
MRKILDLFIG IGIAILATTL LIAAVQTWGT TQFLTGTLLS VEPLFLMDMS VWAVVLTLGI 
VLLLILWLTI AFSFLALVSG LCITCALIMV FAGFSLFWPV LLLILAGWGV GQASQAD