Gene Ssed_0764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0764 
Symbol 
ID5611019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp909917 
End bp911269 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content47% 
IMG OID640931608 
Producthypothetical protein 
Protein accessionYP_001472503 
Protein GI157373903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.798576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000101633 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
TTGAAGATTA AAGTTTTATG TATCAATGCA CTGTTATTCT GCAGTGCACT CAGTTTGCCC 
TATGCCTTGG CCGATGAGGC TCAGGAAACT CAAGTAACTC AAGCGACTCA AACAAAGAAT
GCCAATGCTA ACGGTACGCC ACAAGTGCAT CAAACCGGGA TAAACAGGAG TAAAGATTAC
TCCCCCGAGT TTGTCGCCGT GCCATTTGTT TTCTCTACAG AAACCCTGAG TACTACTGTG
GGAGGGGCTG GCGTCATTAA GCATGCCGGT CAGCCACAGG CCTCTGCGTT TGGTATTGGT
CTCTACAGTA GTAATGAAAG TTGGATCACC TATTTAGGGC TCAACAACTA TCAACTACCC
AAGCTGGATC AATGGCTGTT TTCCGGCGAG TTTAGTCGAG CCAGTTATAA AGAGGGGATC
TACTTTGTTC CTGAAGATGC GAATAGATCG AGCAAAGGTG TTAACCGCTC AGATGCGATG
GCAACCAATC GGGTTATAAC GGTTGGAGAC GAGTTTTACG CCAAGCTACA CATTAAATAT
GTGCTGCCCT GGGGAAAGGG AGCGAAAGGC GCCGCGAGAA GCTTAATGCC CTCGCTAATA
ACGGATCCTC TGAGTTGGGA TCCAAGAGAG TCAGGTGTTA CCAGCTTACA GCTCACCCCC
TTTATTCAAA CTCAGGAACT CCTGGGATAT GAAGATCTGC CGACTGAAAC TCAGGGGTTA
AAATTTAAGT TTGACTGGGA CAATCGGGAT AATGGAAAAA ATAGTACCCG AGGAGGCCGC
ACAAGTCTGA CGGTCAGCCG AGATTTTGGT GCGAGAGAGG GGGGAGCCGA TGATAGAGAA
AGTTGGACTA TGTGGGAGTT TGAACAGAGC GCCTTCCTGT CAATGGGGGA GAGTGACTGG
TTCGGTCAGC AAATATTAGC CTTCAATTTT TACCTTGCCG ATACACCAAC CTGGAACGAC
TATGACTCAA GCACGCAAGC GTATCAGCGA CCTCCATCTT TTGCCGGCGT GACATTGGGT
GGTTTCGATC ATCTGAGAGG CTACTCCAGC AAGCAATTCT ATGGTCGTAG TGCACTGCTT
TACTCTGCAG AGTATCGAGT TCAACCCCGC TGGCAGCCTT TACAGAGTTT ACCCGTATTT
AATCTCTATG ATGTACCTTG GTGGCAATGG GTCGTTTTTG CTGAAGCCGG CCAGGTTGCA
GATGATTTCA GTGCCAGTGA ACTACATGAT GATATGAAAT GGACGCTAGG TGTTGGTGCA
AGGTTTGAAG TTGAAAACGT TATCGTAAGA ACCGAGTTTG CTTATGCCGA AGACGCGAAG
CAATTTTGGA TAATGGTTAA TCAGCCTTTT TAA
 
Protein sequence
MKIKVLCINA LLFCSALSLP YALADEAQET QVTQATQTKN ANANGTPQVH QTGINRSKDY 
SPEFVAVPFV FSTETLSTTV GGAGVIKHAG QPQASAFGIG LYSSNESWIT YLGLNNYQLP
KLDQWLFSGE FSRASYKEGI YFVPEDANRS SKGVNRSDAM ATNRVITVGD EFYAKLHIKY
VLPWGKGAKG AARSLMPSLI TDPLSWDPRE SGVTSLQLTP FIQTQELLGY EDLPTETQGL
KFKFDWDNRD NGKNSTRGGR TSLTVSRDFG AREGGADDRE SWTMWEFEQS AFLSMGESDW
FGQQILAFNF YLADTPTWND YDSSTQAYQR PPSFAGVTLG GFDHLRGYSS KQFYGRSALL
YSAEYRVQPR WQPLQSLPVF NLYDVPWWQW VVFAEAGQVA DDFSASELHD DMKWTLGVGA
RFEVENVIVR TEFAYAEDAK QFWIMVNQPF