| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0762 |
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| Symbol | |
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| ID | 5611017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 907145 |
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| End bp | 908551 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931606 |
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| Product | replicative DNA helicase |
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| Protein accession | YP_001472501 |
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| Protein GI | 157373901 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0305] Replicative DNA helicase |
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| TIGRFAM ID | [TIGR00665] replicative DNA helicase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000711425 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000136332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGTCACAAC AAGGTGCCTT CAAGGCCAAA AAGAAGCCGA GAGATATCCA GATGGATGCA
CTCAAGCTAC CGCCGCATTC TTTAGAAGCG GAGCAGTCAG TACTGGGCGG CTTGATGTTG
GATTCAGATG CATGGGATAG AGTGGCTGAA GCGGTTGTGG CTGAAGACTT CTACTCTCGA
TCTCATCGTA TGATATTCCA AGCGATGGGG AGCTTAACCA GCGCCGGTCA TCCGATCGAT
CTGATCACGG TTTCCGAGCA GTTAGAGGTC GAAGACCAAC TGGAGGAAGC CGGAGGGTTT
GCCTACTTAG GCGAGATAGC GAAGAATACG CCCAGTGCGG GTAATATTTT ATCTTATGCT
GAAATTGTTC GTGAACGCGC CGTCGTGCGT GAAATGATCA AGGTGGCCAA TGAGATTGCC
GATGCCGGTT TTAATCCTGA AGGTCGCAAC TCCGGTGACC TGTTAGACTT AGCTGAAACC
AAAGTCTTTA AGATTGCCGA GTCGCGTGCT AACGCCAACG AAGGTCCCGA AGGGATCAAG
GCCATTCTTG AAAAGACAGT CGATAAGATT GAAGATCTTT ATAACAATCC AACCGGTGGT
GTAACCGGGG TATCGAGTGG GTTTGGCGAT CTGGATAAGA TGACGGCGGG TTTCCAGTCC
GGTGATTTGA TCATCGTTGC GGCGCGTCCG TCTATGGGTA AAACGACCTT TGCGATGAAC
TTGTGTGAAC AAGCGGCGCT CAATGAAGAT AAACCTGTAC TTATTTTTAG TCTTGAGATG
CCTTCAGAAC AGATCATGAT GCGTATGCTC GCCTCACTGG GGCGGGTCGA TCAAACCAAA
ATTCGTACCG GTCAACTCGA TGATGACGAT TGGGCGCGGG TTTCCTCGAC CATGGGGATC
ATGCTCGAGC AAGGTAAGAT GTATATCGAT GATGGCTCTG GTTTAACGCC GACCGATGTT
CGAAGCCGAG CGCGCCGTAT TGCACGTGAA TATGGGGGCT TGTCGATGAT CATGATCGAT
TACCTTCAGT TGATGCAGGT TCCGGCGCTC AAAGATAACC GTACCCTGGA GATCTCAGAG
ATCTCCCGCT CACTGAAGGC GCTGGCAAAA GAGCTTGAGA TCCCGGTTGT TGCACTTTCT
CAGCTTAACC GTTCATTGGA GCAACGTGCC GATAAACGCC CGGTAAACTC AGATCTTCGT
GAATCCGGAG CGATTGAGCA AGATGCGGAT CTCATCATGT TTATTTACCG TGATGAGGTG
TATAACGATG ACTCAGAAAA TAAGGGTACG GCAGAGATCA TCATTGGTAA GCAACGTAAC
GGTCCTATCG GACGGGTACG TTTAACCTTC CAGGGACAGT TCTCTCGTTT TGATAACTAC
GCCGGCCCAC AGTTCGAGGA AGACTAA
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| Protein sequence | MSQQGAFKAK KKPRDIQMDA LKLPPHSLEA EQSVLGGLML DSDAWDRVAE AVVAEDFYSR
SHRMIFQAMG SLTSAGHPID LITVSEQLEV EDQLEEAGGF AYLGEIAKNT PSAGNILSYA
EIVRERAVVR EMIKVANEIA DAGFNPEGRN SGDLLDLAET KVFKIAESRA NANEGPEGIK
AILEKTVDKI EDLYNNPTGG VTGVSSGFGD LDKMTAGFQS GDLIIVAARP SMGKTTFAMN
LCEQAALNED KPVLIFSLEM PSEQIMMRML ASLGRVDQTK IRTGQLDDDD WARVSSTMGI
MLEQGKMYID DGSGLTPTDV RSRARRIARE YGGLSMIMID YLQLMQVPAL KDNRTLEISE
ISRSLKALAK ELEIPVVALS QLNRSLEQRA DKRPVNSDLR ESGAIEQDAD LIMFIYRDEV
YNDDSENKGT AEIIIGKQRN GPIGRVRLTF QGQFSRFDNY AGPQFEED
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