| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0761 |
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| Symbol | |
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| ID | 5611098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 904815 |
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| End bp | 907037 |
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| Gene Length | 2223 bp |
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| Protein Length | 740 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931605 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472500 |
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| Protein GI | 157373900 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000133423 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000000733664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCAATG CATTGATCTC AGCAGTCGTG CTGTCATCTG GTGTCGTATT GGCATCAATC
GACGCACATG CAGATGAGGG CCAGTGGCAA CCTTATCAAA TGCCCTCTAT CGCAGAAAAA
CTTAGCGAGA GAGGCATTGA GATACCAGCA AAACAACTTG CCGATCTCAC GCAGTATCCA
ATGAATGCGG TTGTAGGGCT GGGGTATTGT ACCGCCAGTT TCGTGTCACC CCAAGGCTTA
GTTGTCACAA ACCACCACTG CGCTTACCGT GCTATTCAAT ATAACAGTAA AAAAGAGCAC
AATTATATTG CCGATGGCTT CCTGGCAAAA TCTAAAGATG CAGAACCATC GGCGGGTCCT
AACGAGCGAC TCTATATTAC CGAAGCGGTT ACCGATGTAT CTAAAGCAGT AACAGACAAC
TTAAGCCAAG ACCCTTTGGT GCGCTATGAA GAGATCCAAT CTAATAGAAA ATCTCTTATC
AAAGAGTGTG AAAGCGATAA AAACTACCGC TGTTCGGTGC GCAGCTTTCA TAATGGACTC
GAATACTATC TCATTAAGCA GCTGATTATC CGTGATGTTC GTTTAGTCTA TGCGCCACCT
AAGAGTGTCG GATCATTTGG CGGCGACGTA GATAACTATG AGTACCCTCG TCATTCGGGT
GATTTTACCT TCCTGCGAGC CTATGTAGGC AAAGATGGAC AGCCAGCCGC TTTCGCTGAA
GATAATATTC CATTCACACC TAAAAGCTAC CTTAAAATTA ACGCCGATGG TGTAAATGCC
GGTGATGGTG TCTTTGTTGC TGGCTACCCG GGATCGACCA GCCGTTACCG CTTAACCAGT
GAACTGCAAT TTGCGAGTGA CTGGCTATAT CCAACCCTCG CCTCACGCTA TCAACTGCGT
ATCGACACAA TCAAGGCCAT GGGTAATGCC GACGGTGAAG TTGCGATCAA GTATGCGGGT
ACCTTGGCTT CCATGGCTAA CCGCATGAAG AAGTACAACG GACTCCTCGA TGGATTCAGA
GCCACCGATA TTACCGGCAT TAAGCAGAAC CGCGAAGATA ATTTCCTCAA GTGGCTTACG
GCCGATAAGA CCTACCAGTC ATATCAAGCC CAGTTCGACC AGCTTGAATC CTTGTTAGAT
AAAAAGCGCA CTGGCATGCA GAGCCGTCAT TACTTTGAAA ATGCGCAGTC CAGTGCCCTG
CTCGCCGCGG CAAATAAACT CTATCGTCTG TCAAAAGAGA AAGCTAAGCC GGATAGCGAG
CGTGAAGAGG GATATCAAGA GCGAGACATG AAGATGTTTA AGGCGCGTCT TAAACGTATC
GATTCCAGCT TCGATATCTC GGTCGACAAG ACCCTATGGC TACAAGACTT AAATGCCTAT
ATGGGGCAAG ACAACCGTGT TAACGCTTTC GATGCCATGC TCAACTTTGA TGACAAAACG
GTCACCTTGT CGGATAAACT CGATGGACTC TACTCCCTTA CCTCCTTGAC GGACCAAGAC
AAACGTCTTG CCTGGATGCA AGCGGATGCT AAAACATTCG AAACCAGTGC CGATCCATTC
ATTCGCCTGG CCGTGGCGCT TTATGATAGC AACATGGCAC AAGAGAAAGA GAAGAAGACG
CTTCTTGGAG AACTTTCTCA AGCCAGACCC GGCTATATGA AAGCAATTAT CGCGTACAAC
AAAGCCAACG GCTGGCCTGT ATACCCGGAT GCAAACGGTA CACTGCGTAT CACCTATGGC
ATGGTAGATG GCTATCAATC ACGAGATGCA CTGTACAAAC AGCCTTTCAC ACGCCTTGAA
GGGATCGCCG CTAAACACAC AGGTGTCGAA CCTTTTAACG CGCCGAAGAA AGTGCTAGAT
GCGATTGCAG CGCAGCGTTA TGGTACTCAT AAGGTGGACT CTGTAATTAA AGACCCGAGC
TCTTGGATAT GCCGACTATT TTCTTGCTTA GATAAGCCTG AAGCGTTCAA CTCTGTCCCG
GTTAACTTCC TCTCCAGTGT CGATACCACA GGTGGAAACT CGGGCTCGCC AGTATTTAAC
GGCAAAGGTG AGTTAGTCGG ACTGAACTTC GACTCAACGT ATGAAGCTAT CACTAAAGAT
TGGTTCTTTA ACCCAACCAT TACTCGAGCC GTTCATGTCG ATTTCCGCTA CATCCTATGG
ATGATGGATG AAGTTGACCA TGCCGATAAT TTGATAGCAG AGTTGGAATT AGTCCGTAAT
TAA
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| Protein sequence | MRNALISAVV LSSGVVLASI DAHADEGQWQ PYQMPSIAEK LSERGIEIPA KQLADLTQYP
MNAVVGLGYC TASFVSPQGL VVTNHHCAYR AIQYNSKKEH NYIADGFLAK SKDAEPSAGP
NERLYITEAV TDVSKAVTDN LSQDPLVRYE EIQSNRKSLI KECESDKNYR CSVRSFHNGL
EYYLIKQLII RDVRLVYAPP KSVGSFGGDV DNYEYPRHSG DFTFLRAYVG KDGQPAAFAE
DNIPFTPKSY LKINADGVNA GDGVFVAGYP GSTSRYRLTS ELQFASDWLY PTLASRYQLR
IDTIKAMGNA DGEVAIKYAG TLASMANRMK KYNGLLDGFR ATDITGIKQN REDNFLKWLT
ADKTYQSYQA QFDQLESLLD KKRTGMQSRH YFENAQSSAL LAAANKLYRL SKEKAKPDSE
REEGYQERDM KMFKARLKRI DSSFDISVDK TLWLQDLNAY MGQDNRVNAF DAMLNFDDKT
VTLSDKLDGL YSLTSLTDQD KRLAWMQADA KTFETSADPF IRLAVALYDS NMAQEKEKKT
LLGELSQARP GYMKAIIAYN KANGWPVYPD ANGTLRITYG MVDGYQSRDA LYKQPFTRLE
GIAAKHTGVE PFNAPKKVLD AIAAQRYGTH KVDSVIKDPS SWICRLFSCL DKPEAFNSVP
VNFLSSVDTT GGNSGSPVFN GKGELVGLNF DSTYEAITKD WFFNPTITRA VHVDFRYILW
MMDEVDHADN LIAELELVRN
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