| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0748 |
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| Symbol | rpsI |
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| ID | 5611186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 891680 |
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| End bp | 892072 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931592 |
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| Product | 30S ribosomal protein S9 |
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| Protein accession | YP_001472487 |
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| Protein GI | 157373887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0103] Ribosomal protein S9 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000172866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.041404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGCAA CTCAGTACTA CGGCACAGGC CGTCGCAAAA CATCTACAGC TCGCGTATTC
GCGAAAGTAG GAACTGGTAA CATCGTTGTT AACCAACTTC CTCTAGATCA ATATTTTGGT
CGTGAAACTT CTCGTATGGT TGTTCGTCAG CCACTTGAGC TAGTTGAAAT GACTGACAAG
TTAGACATCT TTGTAACTGT TAAGGGTGGT GGTAACACTG GCCAAGCAGG TGCTATTCGT
CACGGTATTA CCCGTGCATT GATGGAACTT GATGAGTCAC TACGTCCATC TCTACGTGCT
GCTGGTTTCG TTACCCGTGA TGCTCGTAAA GTTGAGCGTA AGAAAGTTGG TCTACGTAAA
GCACGTCGTA AGCCACAGTT CTCAAAGCGT TAA
|
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| Protein sequence | MAATQYYGTG RRKTSTARVF AKVGTGNIVV NQLPLDQYFG RETSRMVVRQ PLELVEMTDK
LDIFVTVKGG GNTGQAGAIR HGITRALMEL DESLRPSLRA AGFVTRDARK VERKKVGLRK
ARRKPQFSKR
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