| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0733 |
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| Symbol | |
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| ID | 5611676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 876900 |
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| End bp | 877703 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931577 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001472472 |
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| Protein GI | 157373872 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.329181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAATCG AGCCGAAACC ATTGGTTGAA ATTCAGAATT TGAATTTCAG CAGGGGCGAA
CATGTCATTT TTGATGATAT CAGCCTGTCT ATCCCTAAGG GGAAAGTCAC CGCCATCATG
GGGCCCAGTG GGATTGGTAA AACGACACTG TTGAAATTAA TGGGCGGACA GCTGATACCT
GACTCCGGGC GTGTGCTGTT TGATGGGCAA GATGTGCATA GATGCAACCG AGAAGAGTTG
TTCAATATGC GTAAACGAAT GAGCATGTTG TTTCAAAGTG GTGCACTTTT TACCGATATG
AATGTGTTCG ACAATGTGGC ATTTGCGTTA AGAGAGCACT CAGGTTTATC TGAGAAGATC
ATTGAGCGCA TTGTACTGAT GAAACTTGAA GCCGTCGGAC TGCGAGGCAC GGCATCAATG
ATGCCCAGTG AGCTTTCCGG AGGAATGCAA CGCAGAGCAG CCCTTGCCAG AGCAATAGCG
CTCGAGCCTG AGATGGTGAT GTACGATGAA CCTTTTGCCG GTCAAGATCC TGTCTCTATG
GGGGTCCTGG TTAAATTGAT CAGTGAGCTG TCCGATGCAC TTCAGCTAAC CTCTGTGGTT
ATCTCTCATG ATGTACAAGA AGTATTAAGT ATTGCCGATT ATGTTTATGT GATGGCCGAT
AAGCGAATCA TCGCTCACGG GACTCCACTT GAGTTGAAAA ATGCTGACAA TCCTCAATTA
AAACAGTTTA TCGGCGGAGA GCCGGATGGT CCCGTTCCAT TTCATTTTCC TGCTAAGGAT
TACCAAAAGG AGCTAGTAGG ATAG
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| Protein sequence | MSIEPKPLVE IQNLNFSRGE HVIFDDISLS IPKGKVTAIM GPSGIGKTTL LKLMGGQLIP
DSGRVLFDGQ DVHRCNREEL FNMRKRMSML FQSGALFTDM NVFDNVAFAL REHSGLSEKI
IERIVLMKLE AVGLRGTASM MPSELSGGMQ RRAALARAIA LEPEMVMYDE PFAGQDPVSM
GVLVKLISEL SDALQLTSVV ISHDVQEVLS IADYVYVMAD KRIIAHGTPL ELKNADNPQL
KQFIGGEPDG PVPFHFPAKD YQKELVG
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