| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0688 |
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| Symbol | |
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| ID | 5612265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 829072 |
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| End bp | 830466 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931532 |
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| Product | nitrite reductase (cytochrome; ammonia-forming) |
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| Protein accession | YP_001472427 |
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| Protein GI | 157373827 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3303] Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCTCTA TACAAAGTAA TAAAGTGAAG GCGCTATCGG TTCTGAGCCT GTGTCTCTCT
GTCTTTGCCG TTAGCCTGCC GGCATCCGCA GGAGCAGTCG ATGCCAAGCT CGATAATGCC
ATGCAGGAGC AGTTTCCTAA TCAGTATAAG AGTTGGCTGG CTACATCTGA GCAGACGGAG
CGACAAGATA TGTTGGCAAG CTACCCGGCT GCCATTATTC TGTGGGCGGG TTCCTCTTTT
GCTAAAGAGT ACCATAGTCC TCGGGGTCAT CACTTTGCCG TCGCCGATGT TACCCATACT
CTGCGTACCG GAGTGGCGGT GGCAGAAGGA GAGAAAGGGC TGTCAGCCAG CTGCTGGACC
TGTAAATCTC CGGATGTTCC TCGTTTAATC GGTGAGCTTG GTGTCGAAGG CTTTTCGGCA
AAAAACTTTA CCGATCTGGG CACCGAAATC CAGAGTGTGG TCTACTGCAC CGATTGTCAT
GTTAAAGGCT CTGCCAAGCT GGCATTGCCA CGTCCACATG CACAAGACGC CATGACTAAG
GCTCATATAC CGTTCGATAA ACAAGATATC AACATGCAGG GGGCACAGGT CTGTGGTCAA
TGTCATGTGA GCTACTATTT TCAGCCAGAA CGCAGTAACA AGGTCAATAT TCCCTGGATC
TTTGGCAACA ATGCCGATGA CATCGAGAAG TATTACGATA CCAGACGCTT CTATGAGTGG
ATCCACCCTA TCTCTAAAAC GCCTATCCTC AAGGCGCGTC ACCCTGAGTT TGAGCACTGG
AGTCGAAGTG AACATGCCAA GCAGGGCGTA ACTTGCATTA CCTGTCATAT GCCGGCTACC
AGTGATGATA AGGGGAATCA ATTTACCAGC CATAAAGTCA GTAAGGCGTT AGAGCATTAC
CCTCAAGCTT GTCAGGGCTG CCACGGGGAT AAAGCGGCAT TAATGCAGAC GCTGGAAACG
GGTAAACATG AGATAGAAGC TAAGGCCAGA GAGGTTGAAG GACTATTGGT TAAGGCGCAT
TATGAGGCGC AGGCGGCCTG GGATGCCGGT GCGACTTGGC CTATCATCAA TGATGCCCTG
ATGGCTATCC GTCATTCACA ATGGCGTTGG GATTTTGCCA TGGCATCCCA TGGATTATAT
GCCCATAACC CAAGTGAAGG CCGTGAGCTG TTAGATACCG CGATCGAGCA GGCCAAATAT
GCGCGCACGT CGCTGGCGGA GATCTTAAAA ATGCTTGAGG TGAAAGAGGT TAATTATCCC
GATATCAGCA CCAAGGAGAG TGCCCAGAAG GCGGTTGGGA TATCGCTCGA TACCTTAACT
GAACAGAAGA AAGCCTTTCT CAAGGAGGAG GTGGATAAGC ACTGGTCTGA AGTGAGCCGC
CACGGTTATG AGTAA
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| Protein sequence | MISIQSNKVK ALSVLSLCLS VFAVSLPASA GAVDAKLDNA MQEQFPNQYK SWLATSEQTE
RQDMLASYPA AIILWAGSSF AKEYHSPRGH HFAVADVTHT LRTGVAVAEG EKGLSASCWT
CKSPDVPRLI GELGVEGFSA KNFTDLGTEI QSVVYCTDCH VKGSAKLALP RPHAQDAMTK
AHIPFDKQDI NMQGAQVCGQ CHVSYYFQPE RSNKVNIPWI FGNNADDIEK YYDTRRFYEW
IHPISKTPIL KARHPEFEHW SRSEHAKQGV TCITCHMPAT SDDKGNQFTS HKVSKALEHY
PQACQGCHGD KAALMQTLET GKHEIEAKAR EVEGLLVKAH YEAQAAWDAG ATWPIINDAL
MAIRHSQWRW DFAMASHGLY AHNPSEGREL LDTAIEQAKY ARTSLAEILK MLEVKEVNYP
DISTKESAQK AVGISLDTLT EQKKAFLKEE VDKHWSEVSR HGYE
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