Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0662 |
Symbol | |
ID | 5612953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 801920 |
End bp | 802207 |
Gene Length | 288 bp |
Protein Length | 95 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640931507 |
Product | hypothetical protein |
Protein accession | YP_001472402 |
Protein GI | 157373802 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.230085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATAC AAGACATGAG CAAGTTAAAT GCCGAAGAGC GTAAAGCCCG AGATAACGAA CGTTTTTCAC AACGAGTGGA TGAGCGCAGG GTAAAGGGCG AAGATGTCGT TGCGTACGCA CTTGCCAATA AAAAAGCCTT TAAGTTTCTG ACTAAATCCG AGAAACACAG CCTTAAAGAA AGACAAGCAG CGCTTCTCGA AGAGGCGAAC CTTAAAGCGA AAGAACAGCT TAAGCTTAAG GAGCAGCAAG AGTTAGAAAG GATTCAAGCG GAGTTTACCG AACAGTAA
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Protein sequence | MRIQDMSKLN AEERKARDNE RFSQRVDERR VKGEDVVAYA LANKKAFKFL TKSEKHSLKE RQAALLEEAN LKAKEQLKLK EQQELERIQA EFTEQ
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