| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0618 |
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| Symbol | |
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| ID | 5612087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 746967 |
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| End bp | 747827 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931463 |
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| Product | ABC-3 protein |
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| Protein accession | YP_001472358 |
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| Protein GI | 157373758 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.087201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGATAT TTATCTCATA TACGAGTTAC TTCAATCAAA GAGAATCAGT TATGTTTGAT
CTCGATCTGC TCTCGATTTT ATTACCGGCC TTTGCCGCCG GAGTATTGGT GTTATCTACC
CATGTTGTTC TCGGGCGTCA GGTATTAAAA CGGGGCATCA TTTTCATCGA TCTGGCTATT
GCTCAAGTGG CTGCTCTGGG GGCGATTGTC GCGCACCTGA ACCATGATAT TGAACATCTT
CCCTTCTCAA ATATCTGGAT GCCGGCCCTG TTTGCTTTGG CTGGAGCGGC TTTTATTGCC
TGGCTATCTA AACGAATGGC CGATGAGCTG GAAGCGATAA TCGGGTGTTT CTATGTACTC
GCTGCCGTGG CTGCCATGCT AATGTTATCT AATGATCCCC ATGGCGCAGA GATGCTGAAA
CAGTTGATGT CTGGTCAGAT CCTCTGGGTA AACTGGTCTC AACTTGTCCT TCCCGCCTCC
GTGTCGGCAA TCGTGCTGTC TGTGATCTAT CTTAGACCCC GACTGCTTGA TGGAAGTGGG
TTTTATATTA TGTTTGCTCT GGTCATCACC CTCTCTGTCG AACTGGTCGG AGTTTATCTG
GTTTTCAGTA CCCTTATACT ACCCGCACTG GCGGTTAATA AGTTTGGCAG TAAATACCGT
TTAGTCGCGG CTTATCTGGT GGGGCTAACT GGGTATATTT TCGGGTTAGT GCTATCGGCG
AGTTTCGATC TGCCAAGCGG AGCGGCGATA GTCGCAACTC TTGCGGTCAG TGCCATATTG
TTCAGGCTGG TGTTGGGGCT ATTAAAGCCG AAACAGAGCG GTGGTTCGGA TGAGGCTCAA
TTCGAATATA ACCAAAATTA A
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| Protein sequence | MSIFISYTSY FNQRESVMFD LDLLSILLPA FAAGVLVLST HVVLGRQVLK RGIIFIDLAI
AQVAALGAIV AHLNHDIEHL PFSNIWMPAL FALAGAAFIA WLSKRMADEL EAIIGCFYVL
AAVAAMLMLS NDPHGAEMLK QLMSGQILWV NWSQLVLPAS VSAIVLSVIY LRPRLLDGSG
FYIMFALVIT LSVELVGVYL VFSTLILPAL AVNKFGSKYR LVAAYLVGLT GYIFGLVLSA
SFDLPSGAAI VATLAVSAIL FRLVLGLLKP KQSGGSDEAQ FEYNQN
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