| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0611 |
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| Symbol | |
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| ID | 5613125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 738591 |
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| End bp | 739457 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931456 |
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| Product | dehydratase |
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| Protein accession | YP_001472351 |
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| Protein GI | 157373751 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2030] Acyl dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000129975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAAAAAG ATTATTCGAT TGAATTAAAG GCGTTGCCTT CGCTGTTCTC CTTGTATCGC
AAGATCTTCT TTGGCCGTAA GCCGGGTTGG AATGAACAAG CATTACCGAA AATCCAAGTC
AGTAGTTCGG GTGTATGTCT GTCTCGGGAA AAAGTTGAGC AATACGCCTC AGTATGTGGT
TTTGACTTCG ATGGTAAAAC ATTACCCCTG ACCTATCTCT ATGTGATGGC ATTTCGTCTG
CATGCGGTGA TTTTTACCCA TCAGGCTATC ACTTTCCCGC TGCTTGGCAT GATACACCTA
AGAAATAGCA TCACCTTGCA CAGAGCCGTC AGTGTCGATG AGAAATTCAA CTTAGAGTGC
GAATTGACCG ATAGTCAAGT AACTGATTCC GGGCTGGAAT TTGATCTCGT ATCTCGTGCT
TTCGTCGATG GTGAGTTGGT GTGGGAGTCG CTATCGACTT ACCTGTATCG TATCGAAGGT
GCTACGCGTC GTGTTCGCCC GCCAAAGGGG AATGGCATGG CGTGGGAAAC GCCCCAAGCC
TGGTCCTTGT CCGATGATCT CGGACGCCGT TATGCTAAGG CCTCCGGTGA TTACAACCTG
ATCCACCTAC ATCCGCTACT CTCAAAGCGA TTTGGTTTCG ATAGAGTTCT GGCTCATGGC
ATGTGGTCTA AGGCTCGCTG TATTGCTCAG ATGATGCCTC AGATTGGCGA TCGTCCCTGT
ACTGTGGATG TCGCTTTTAA GCTGCCACTT TTCATGCCCT CCGATGTGAG TTTTGCAGCC
GAAATTAACG AAGACAATTT AATATTTGAA TTGAGAGATG CCCGTGGACG TCGTCCGCAC
CTCTCCGGAG AGCTTAGGTT TCTTTAG
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| Protein sequence | MEKDYSIELK ALPSLFSLYR KIFFGRKPGW NEQALPKIQV SSSGVCLSRE KVEQYASVCG
FDFDGKTLPL TYLYVMAFRL HAVIFTHQAI TFPLLGMIHL RNSITLHRAV SVDEKFNLEC
ELTDSQVTDS GLEFDLVSRA FVDGELVWES LSTYLYRIEG ATRRVRPPKG NGMAWETPQA
WSLSDDLGRR YAKASGDYNL IHLHPLLSKR FGFDRVLAHG MWSKARCIAQ MMPQIGDRPC
TVDVAFKLPL FMPSDVSFAA EINEDNLIFE LRDARGRRPH LSGELRFL
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