Gene Ssed_0600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0600 
Symbol 
ID5609898 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp731198 
End bp731470 
Gene Length273 bp 
Protein Length90 aa 
Translation table11 
GC content42% 
IMG OID640931445 
Producthistone family protein DNA-binding protein 
Protein accessionYP_001472340 
Protein GI157373740 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGA CTGAACTTGT TGCAAAAATA GCTGAGAATG CGGAACTGAC TAAAGCAGAA 
GCTGCACGCG CACTAAAATC TTTTGAAGAG ACTGTCACCG AAGCGATGAA AAATGGTGAT
AAGATCTCTA TCGTTGGTTT TGGTTCTTTT GAAACTTCTA ATCGCGCTGC ACGCACTGGT
CGTAACCCAC AAACGGGTAA AGAGATCCAA ATCCCAGCAG CGACCGTTCC AAAATTTAAA
GCTGGTAAGA CTCTGAAAGA TAGCGTTAAC TAA
 
Protein sequence
MNKTELVAKI AENAELTKAE AARALKSFEE TVTEAMKNGD KISIVGFGSF ETSNRAARTG 
RNPQTGKEIQ IPAATVPKFK AGKTLKDSVN