| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0590 |
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| Symbol | |
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| ID | 5609783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 719671 |
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| End bp | 720528 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931435 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472330 |
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| Protein GI | 157373730 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00339464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000221441 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAAAAGC GTATTCTTAG CATTGCTATT CTTGCTTCAA TGACATCAGG TTTAACCTAT
GCGGCCGATG ACGCCGATAT CGATATGTCG AACCCAACCG ACGTATACAC TTCTATCGGT
GCTTCATACG GTAGTGAAGG TGCCAACCTC AAGGGGCAGT TGATGCTGTC TGAAAAGACA
GGAGATACAG GTCAGAAGAC AGGCATCATT TTCGAAGCCA AAAACATCCT AAACGAAGGG
GATAAGTCTC CACAGTTTAC CGGCATGGTG CAGCATCCTG ACTACGGCAT GGTGCCAACC
TTTAACGATG AAACCAGCAA GCGTTCATAC CGTCTTCGTT ACGGCACCAT CAATACTACT
AATGGTACTG GCTGGTCTAT CGACGCGATT CTGGCTGACC ATCCTTTCTA CGGCAGCATG
GCCGTCGTTC AAGCCGGTCC GGTAATGACG ATTCCAGTAA CCGATAACTT CTATATCTGG
CCTATCTTGT ATGCAGGTGG TGTTGTTATT GAAGATAATA TGTCACAAAT TCTTCCACCT
GACATGGCGG GAAGCACCGT AGTATCGAGT AGTGGCATCG ACGTTCCTTC ATTGATTCTG
ACCGGTATGG TCTATGCGCG TTATGCCTTC AACGATAACT TTTGGGCACT GCTAAGCACT
TCATATACAG AGGAGATACA AGGTAAATCC TGGAGCGATG ACATCATGGA TGGCGGACTA
CAGATGGCGA GCTTCTCCGC TGAGATCTCG GTGGCCTACC AGATGAACAA GCGTCAAAAC
GTACGTGTTA ACTATAAGAC TGATAACAGC GATAGCACCG ATGATAGCTA CTGGATTGAG
TATAACCACG CGTTCTAA
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| Protein sequence | MKKRILSIAI LASMTSGLTY AADDADIDMS NPTDVYTSIG ASYGSEGANL KGQLMLSEKT
GDTGQKTGII FEAKNILNEG DKSPQFTGMV QHPDYGMVPT FNDETSKRSY RLRYGTINTT
NGTGWSIDAI LADHPFYGSM AVVQAGPVMT IPVTDNFYIW PILYAGGVVI EDNMSQILPP
DMAGSTVVSS SGIDVPSLIL TGMVYARYAF NDNFWALLST SYTEEIQGKS WSDDIMDGGL
QMASFSAEIS VAYQMNKRQN VRVNYKTDNS DSTDDSYWIE YNHAF
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