| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0564 |
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| Symbol | |
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| ID | 5610410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 687182 |
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| End bp | 688027 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931409 |
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| Product | nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase |
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| Protein accession | YP_001472304 |
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| Protein GI | 157373704 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.314377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATCA GCCTGTTACA GTGCCAAAGC AGTCGAGATA TAGCCCAAAA CCTGCAGTTT
ATCGAGTCGC AGCTTAGTCT TCTGCCCAGA GTGTCGGGTG AGGAGCAACT GGTCGTGTTA
CCCGAGTGCT GCTTACTGTT TGGTGGCCAT GAGAGTCAGC AAGGAGAGTA TGCACTTAAT
TCTTGCTCAG AAGAGAACCC GCTAAAAACA GCGATGTCGG ATCTGGCCAG AAAATTTGAT
GTCTACCTTG TCGCCGGTAC TATCCCTGTG CTTGCAGACG ATAAGCGGGT TTATAGCCGT
ACTTATCTGT TCGACTGTGC GGGTAAAGTC CTGGGTGAAT ACGATAAGCT GCATCTGTTC
GATGTCGATG TTTCCGACGG CACCAAGGAG TATCGTGAGA GCGATACTTT CTGTCCCGGT
GAGAAAATTA GTGTAATCGA TACTCCCTTT GGTAAGTTAG GATTAGCAAT ATGTTACGAT
CTGCGCTTTC CGGATCTGTT TAGGGCGATG AGACTGGCCG GAGCCGAGAT AATCGCCCTA
CCAGCCGCCT TTACTAAGGT GACTGGCGCC GCACATTGGC AGCCCTTGAT TCAGGCCCGG
GCGATAGAGA CACAATGCTT TATTTTAGCC GCCGCTCAAT GGGGGCAACA TAACAAAGGC
AGCCGGGAAA CTTGGGGGCA GAGTATGATA GTCGATCCCT GGGGACGGAT TAAGGCGGAA
AAAATGACAG GTTGTGGCTG GGTTCAAGCG TCACTGGACA AGAGTGAACT TGCACAAATC
AGACAACAGA TGCCGGTAGA GCAGCATAAC CGGTTTTCAC CGCCACAATT ACAACAAATT
AAATAA
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| Protein sequence | MQISLLQCQS SRDIAQNLQF IESQLSLLPR VSGEEQLVVL PECCLLFGGH ESQQGEYALN
SCSEENPLKT AMSDLARKFD VYLVAGTIPV LADDKRVYSR TYLFDCAGKV LGEYDKLHLF
DVDVSDGTKE YRESDTFCPG EKISVIDTPF GKLGLAICYD LRFPDLFRAM RLAGAEIIAL
PAAFTKVTGA AHWQPLIQAR AIETQCFILA AAQWGQHNKG SRETWGQSMI VDPWGRIKAE
KMTGCGWVQA SLDKSELAQI RQQMPVEQHN RFSPPQLQQI K
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