| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0517 |
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| Symbol | |
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| ID | 5614162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 634358 |
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| End bp | 635047 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931363 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001472258 |
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| Protein GI | 157373658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAAATA AAAGAAGACT CTTTTTAAAA TGTGCTTGTG CCACAGCGGT CGGAGCGGTT
GGATCAACAA AGCTTATAGC AGCCCAATCA GATACTAAAA CAGATGATAC CGAAGCCGAG
GTCAATTACG CACTCATTCA TGATGAAACT AAGTGCATTG GTTGCGAAGT GTGTGTTGAT
GCCTGTCGTG AAACGAACAA TGTACCCGAA GGTGTAAGCA GATTAGAGAT TGTTAAAACT
GGCCCATTTG GTGAGTATCC TGATCAGTAC TTTAGCTTCT CTCGCAAATC ATGTCAGCAA
TGTGATGGAA CTCCCTGTGT CAATGTCTGC CCAACAGGGG CTGCGTACAA AGATCCTAAA
ACAGGCATTG TCTCAGTAGA CAGTTGGAAA TGTGTTGGGT GTATGTACTG CATTGCCGCA
TGTCCATATC AGGTCCGATT TATCAACCCT GTTACCAAAG CCGCTGATAA ATGTGATTTC
TGTAAAGAAA CTCGTCTTAA AGAAGGAAAG TCACCTGCTT GTGTCGCTGC TTGCCCAACA
AAAGCGCTTG TCTTTGGCAA CCTAAAAGAT CCTGATTCTG AAATCGTTAA GGTTCTAAAA
ACGACACCAA ATTATCGAAG TAAAACAGAT CTGGGAACTC GTCCAAAACT ATTCCGTATT
GCAGCAAAAA ATGGGGAGAT AAAGCTATGA
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| Protein sequence | MENKRRLFLK CACATAVGAV GSTKLIAAQS DTKTDDTEAE VNYALIHDET KCIGCEVCVD
ACRETNNVPE GVSRLEIVKT GPFGEYPDQY FSFSRKSCQQ CDGTPCVNVC PTGAAYKDPK
TGIVSVDSWK CVGCMYCIAA CPYQVRFINP VTKAADKCDF CKETRLKEGK SPACVAACPT
KALVFGNLKD PDSEIVKVLK TTPNYRSKTD LGTRPKLFRI AAKNGEIKL
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