| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0484 |
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| Symbol | |
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| ID | 5613354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 598369 |
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| End bp | 599157 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640931329 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001472225 |
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| Protein GI | 157373625 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT TTAAGAAAAG TATCATCGCA ATATCTTGCT TACCACTATT TTTATCTGTG
CAATGCATGG CCGAGACGGA GTTGTTAGCC GATAGCAATA AAGAGTCCTA TAGTATCGGA
GCATCTTTTG GTAGCTATAT TTCCAGCCAG TTATACAGCC AGTCGCAATT GGGAGCCGAG
GTCGATGTTG ATATCGTCGT TGAGGGGCTT CTCGATGCAT TGAAAGGTCA GTCAAAACTA
TCTAATGAAG ACATTGTCTC CTACCTCAAT ATCCGAGCCG AGCAGTTAAA TACAGCTAAG
GAAGAGAAGG ATAAAGATCT TGCACTTAAA AACTTAGTTG CAGGTGAGAA ATTTTTGGCC
GAAAACAAAA AAAGTGCTGA TGTTAGAACG ACCGAGTCGG GCCTACAGTA TGAAGTCATT
AGTCAGGGGA GTGGCGCAAA ACCACAAGCG AATGATGTCG TGACGGTTCA TTACAAAGGC
TACCTTATTG ACGGCACTGA GTTCGACAAC TCATACACAC GTGATGAAGC GAATCGATTT
TCACTGGTAA CTGTGATTGA AGGTTGGCAA GAGGGGCTAC AGCTGATGAA GGAGGGGGCT
AAGTATAAGT TCAATATCCC TTCTGAGCTT GCCTATGGGG AGCGCCAGGT TGGCATGATA
TCTCCTAACT CAGCGTTAGT TTTTGAAGTT GAGCTCGTCA AGGTTGAAGC ACCTGGTGAA
AACGCTCATG GCATGGGCCT CAGTGGTATG GGGATGGGTG GCATGATGGG TGCTAATCCA
CATAAATAA
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| Protein sequence | MKTFKKSIIA ISCLPLFLSV QCMAETELLA DSNKESYSIG ASFGSYISSQ LYSQSQLGAE
VDVDIVVEGL LDALKGQSKL SNEDIVSYLN IRAEQLNTAK EEKDKDLALK NLVAGEKFLA
ENKKSADVRT TESGLQYEVI SQGSGAKPQA NDVVTVHYKG YLIDGTEFDN SYTRDEANRF
SLVTVIEGWQ EGLQLMKEGA KYKFNIPSEL AYGERQVGMI SPNSALVFEV ELVKVEAPGE
NAHGMGLSGM GMGGMMGANP HK
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