| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0476 |
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| Symbol | |
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| ID | 5613019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 589131 |
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| End bp | 591197 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931321 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001472217 |
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| Protein GI | 157373617 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC ATAAGATTTT ACCTAGCGTA CTCTCGACAG CGCTCGCCGC TAGCTTATTT
ATAACAGGCT GCTCGCAGAC CCCTTCACCA ACAAACTTGT CAGATCGAGC CACTATCCAA
GATCAAAGTC AGCAAGTTCA ACTGCTACCT GTTGAAGCCT TTTTCAACGA GCAAGGGATC
AGTGGACTCA AGAGCTCCAG TGACGGAAAG TGGTTAGCCT TTTTCAAAGA GTATCAAGGC
GCGAAAAACA TCTATCTGAT GGCCACCGGT ACTGATCTCG ATGAAGCTTT TCCTATTACC
ACCTCAAAGG ATCCGATTTA CAGCTTCCGC TGGTCACACC AAGGCAATGA GATCTTCTTC
CTTAAAGATA CCGGTGGTAA TGAAAATACC CAGATCTATA AACTCTCTCT GGATACGAGC
CAGATTAAAC CTGTCCCGAA CATCACTGCG CTCACCAGTA ATACAGACAT CAGATATGAC
CTGCTCAAAC AACCAAAAGA TAAGCCCAAC ACTTTGGTTG TCATGTCGAA TCAAGATAAT
CCTCAGCAGA TGGATCTCTT TCGTCTGAAT ATCGATTCCG CAAAAATAAC CAATATTTTT
TCTAACACCT ACGGCTTCTC TTCCATAGAG ACAAACCAAC AAGGCGTTCC GGTACTCGGC
ACCAGCAGTA ACCCAGACAA TACTTCCGAT CTCTACGCCA AAATTTCTGG GAAATGGACG
AGTCTGATCA AGACCCAATT TGGTGAAGAC ATAGATATTC TTAGCTTCGA TGAAGATAAC
AACTTGGCCT ATCTTCGTGC CAACATCCAA GGACGAGACA AGCTACAACT GTTACGCCTC
AATATGACCA CAGGTAAAAT CGTCACTCTA CATCAAGATC CGCAGGATGA ATCTGATGTT
TATGATGTGC TCTTTAACGA TGAAGGTGCA CCACTTGCCG TCTCCTATTA TGGCGGTCGT
TTACGCACTT ACCCGCTGGA TGAAACCTTT GCTGACAACT GGCAAAAAAT TAACGACCAC
TTCACTCAAG ATGTGGAGAT AACCATCACA GATAGAAACG AGAAAACCGG TCTGTGGCAG
CTACATATCG CCAGCGATGT CGATATGGGA AGCGACTATC GCTTTGATGC CAATACTGGA
CTCGTGAGCC TTTTGCTTGA GCAAGAAGCA TCGATTAGCC CTGAGCTGCT ATCAAAACGT
CAATCCATCA CCTACCAGGC TCGCGATGGC GTGACCATTC AGGCCTATCT GACCCTACCT
AAGGGACAAA CACAAAACCT GCCGACAGTC ATTCTTCCCC ATGGTGGCCC CTGGTCCCGA
GACTACTGGA CTTTAAGTTC AGGCTATTTC AACCCGATTG CTCAGCTATT GGCAAACCGC
GGCTATGCGG TATTACAGCC CAACTTTCGT GCCTCTACAG GCTTTGGTAA ACGCTTCCTC
AATGCAGGCA ATAAAAACTG GGGCACCGGC AGCATGCAGG ACGATCTGAC CGACGGGGCG
CATTACCTCA TCAAAGAGGG GATAGCCGAT AAACAGCGCT TAGGGATCAT GGGCGCATCT
TATGGTGGCT ATGCAGCGCT TGCCGGCGCG ACCTTCACCC CGGATCTGTA TCAGGCGGTG
ATCTCCTATG TCGGTCCCTC TAGCCTTATT ACACTACTGG AATCATTCCC TCCTCACTTC
CGTCCCTATC TGGGTCAGTT TTACAGTGCG GTAGGCGATC CTGAGATCGA TACAGACAGA
GTAGATATGA AGGCTCGTTC TCCCATTAAT TTCGTCGATA ACATTAGGGC GCCGCTGATG
TTAGTCCAAG GGGCGAATGA TCCCAGAGTG ACCCAAATTG AATCCGATAA TATCGCGCGG
GTGATGTATA ACCGCAAACT ACCGGTTGAA TACATTCTGG CAAAAGATGA AGGTCATGGC
TTCCGTAAAC GGGATAATAA GTTAGCCTAT ATTGTGGCTA TGGAGCAGTT TTTCGGTAAA
CACCTGGGCG GCCGAGTAGA TAATGCGGTG ACTCCCGCTC TCACCGCACA CCTCGATACG
CTAAAGGTTG ATGTGAGCCG ATTATAA
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| Protein sequence | MKTHKILPSV LSTALAASLF ITGCSQTPSP TNLSDRATIQ DQSQQVQLLP VEAFFNEQGI
SGLKSSSDGK WLAFFKEYQG AKNIYLMATG TDLDEAFPIT TSKDPIYSFR WSHQGNEIFF
LKDTGGNENT QIYKLSLDTS QIKPVPNITA LTSNTDIRYD LLKQPKDKPN TLVVMSNQDN
PQQMDLFRLN IDSAKITNIF SNTYGFSSIE TNQQGVPVLG TSSNPDNTSD LYAKISGKWT
SLIKTQFGED IDILSFDEDN NLAYLRANIQ GRDKLQLLRL NMTTGKIVTL HQDPQDESDV
YDVLFNDEGA PLAVSYYGGR LRTYPLDETF ADNWQKINDH FTQDVEITIT DRNEKTGLWQ
LHIASDVDMG SDYRFDANTG LVSLLLEQEA SISPELLSKR QSITYQARDG VTIQAYLTLP
KGQTQNLPTV ILPHGGPWSR DYWTLSSGYF NPIAQLLANR GYAVLQPNFR ASTGFGKRFL
NAGNKNWGTG SMQDDLTDGA HYLIKEGIAD KQRLGIMGAS YGGYAALAGA TFTPDLYQAV
ISYVGPSSLI TLLESFPPHF RPYLGQFYSA VGDPEIDTDR VDMKARSPIN FVDNIRAPLM
LVQGANDPRV TQIESDNIAR VMYNRKLPVE YILAKDEGHG FRKRDNKLAY IVAMEQFFGK
HLGGRVDNAV TPALTAHLDT LKVDVSRL
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