| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0463 |
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| Symbol | |
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| ID | 5612174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 574310 |
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| End bp | 574783 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931308 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472204 |
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| Protein GI | 157373604 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1585] Membrane protein implicated in regulation of membrane protease activity |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000652394 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAGTTAT CAAATCCCAT CATTATCTGG GGCTGCATTG GACTGGCATT GATGCTGGCT
GAGATCATTA TTCCCGGGGG AATCGTCATC TTGCTCGGTG GTGCTTGTCT GGTTGTCGCA
TCGGCACTGG CTGTTGGGTT AGTCGAAGGA ATAGTGCAAA GCCTCACACT CTGGTTTATC
GTTTCTATTG TCTTTTTATT AGGTTTCAGG CAGCTTACCC AAAAGCTGGT TGGCGGAGAT
TCTCACGTTG ATAATACCGA TGAGGAACTC GATATCTATA ATCAGACTGC CGTCGTTAAA
GAGACTATCG GTCCGGCGCA ACATCAGGGG CGAATCGAAT TTCAGGGTAT CGAATGGTCG
GCACTTGGCG ATGGTAGCGA AATCGCTGCG GGAACTCGCG TACGTATCAT CTGCCGGGAT
AATATCGCCT TGGTTGTCGA ACCCTGCCCA GACGAAGTAA ACATGAGTAA TTAA
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| Protein sequence | MELSNPIIIW GCIGLALMLA EIIIPGGIVI LLGGACLVVA SALAVGLVEG IVQSLTLWFI
VSIVFLLGFR QLTQKLVGGD SHVDNTDEEL DIYNQTAVVK ETIGPAQHQG RIEFQGIEWS
ALGDGSEIAA GTRVRIICRD NIALVVEPCP DEVNMSN
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