| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0433 |
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| Symbol | |
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| ID | 5611189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 528266 |
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| End bp | 529693 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931278 |
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| Product | dihydrolipoamide dehydrogenase |
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| Protein accession | YP_001472174 |
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| Protein GI | 157373574 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes |
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| TIGRFAM ID | [TIGR01350] dihydrolipoamide dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000206937 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAACG AAATCAAAAC TCAGGTATTG GTAGTAGGTG CAGGTCCTGC TGGTTATTCA
GCGGCATTTC GTGCGGCTGA TTTAGGTCTG GAAGTCATCA TCGTTGAGCG TTTCAACACG
CTTGGTGGTG TATGTTTGAA TGTAGGCTGT ATCCCATCAA AAGCGCTGCT TCACGTATCT
AAAGTGATCG AAGAGGCGAA AGCGGTTGCG AGCCACGGTG TTGTTTTTGG TGAGCCGCAA
ATTGATCTTG ATAAGCTTCG TAGCTTTAAA GAAACGGTGA TTAGTCAGCT AACCACAGGT
TTGGGCGGAA TGTCCAAGAT GCGTAAGGTT GATGTTGTTA ATGGTTTTGG TAAGTTTACC
AGCCCTAATA CCATTGAAGT TACGGGTGAA GATGGCGTTA AAGTTATTCG CTTCGAACAA
GCCATTATTG CCGCGGGTTC ACGTCCTATT CAATTGCCAT TTATCCCACA TGAAGACCCA
CGTATCTGGG ATTCGACCGA TGCGCTAGAG CTTAAAGAAG TACCTGGAAA GCTACTTGTT
ATGGGTGGTG GTATTATCGG CCTCGAGATG GGGACAGTAT ACTCGTCACT GGGTAGTGAG
ATTGACGTGG TTGAGATGTT TGACCAGGTT ATTCCTGCCG CTGACAAAGA TATCGTTCGT
GTTTACACTA AGAAGATTAA GAAGAAATTT AATCTTATCT TACAGACTAA AGTTACCGCC
GTTGAAGCTA AAGAAGATGG TATCTATGTG TCTATGGAAG GTAAGAAAGC GCCTGCGGAA
CCTGTACGTT ACGATGCCGT GCTTGTGGCA ATTGGCCGTA CGCCAAATGG CAAGCTGATT
GATGCAGAAA AAGCGGGCGT TAATATCGAT GAGCGTGGTT TCATCAATGT CGATAAGCAG
ATGCGCACTA ACGTGCCAAA CATCTATGCT ATCGGCGATA TCGTTGGCCA GCCAATGCTT
GCGCATAAAG GTGTACATGA AGGTCACGTT GCCGCAGAAG TTATCTCTGG TCTTAAGCAT
TTCTTCGATC CTAAGGTTAT CCCATCAATT GCCTATACCG ACCCTGAGGT CGCGTGGGTA
GGTTTAACTG AGAAAGAAGC GAAAGAGCAA GGCGTTGCTT ATGAAACGGC TACTTTCCCA
TGGGCCGCAA GTGGGCGTGC TATCGCATCA GACTGTAGCG ATGGTATGAC TAAGCTTATC
TTCGATAAAG AGACACACCG TGTGATCGGT GGTGCTATCG TAGGCGTTAA CGGTGGTGAG
CTATTGGGTG AAATCGGCCT TGCTATCGAG ATGGGTTGTG ATGCTGAAGA CTTAGCGTTG
ACTATTCACG CTCACCCAAC CCTACATGAA TCAGTTGGTT TGGCCGCTGA AATCTATGAA
GGTTCTATAA CTGATTTGCC TAATCCAAAA GCAAAAAAGA AAAAGTAA
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| Protein sequence | MSNEIKTQVL VVGAGPAGYS AAFRAADLGL EVIIVERFNT LGGVCLNVGC IPSKALLHVS
KVIEEAKAVA SHGVVFGEPQ IDLDKLRSFK ETVISQLTTG LGGMSKMRKV DVVNGFGKFT
SPNTIEVTGE DGVKVIRFEQ AIIAAGSRPI QLPFIPHEDP RIWDSTDALE LKEVPGKLLV
MGGGIIGLEM GTVYSSLGSE IDVVEMFDQV IPAADKDIVR VYTKKIKKKF NLILQTKVTA
VEAKEDGIYV SMEGKKAPAE PVRYDAVLVA IGRTPNGKLI DAEKAGVNID ERGFINVDKQ
MRTNVPNIYA IGDIVGQPML AHKGVHEGHV AAEVISGLKH FFDPKVIPSI AYTDPEVAWV
GLTEKEAKEQ GVAYETATFP WAASGRAIAS DCSDGMTKLI FDKETHRVIG GAIVGVNGGE
LLGEIGLAIE MGCDAEDLAL TIHAHPTLHE SVGLAAEIYE GSITDLPNPK AKKKK
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