| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0417 |
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| Symbol | |
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| ID | 5611029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 487046 |
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| End bp | 487945 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931249 |
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| Product | peptidase M23B |
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| Protein accession | YP_001472158 |
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| Protein GI | 157373558 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000018485 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000198891 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTGTAA CAGTTTTTAT TCAAGGTCGA AATGGCGCCT CTCGATGGCA GCCTGGTAAA
CGTTGGCTGT TGTTACCTGT TCTATTAATA GCAGCAGGTT CAGGGCTATA TCAGCACAGC
GCCAAACAAA TTCTGCAACA GCAGACCAAT GTCGATAATG AGCGAGTTGC GCGTGAAGCG
CAAAAAAATG AGCTCATAGA GCTTAAAGGT GCGACAGAAG CCCAACTGGC TATGCTCGTA
ACTCACGTTG CCCGCATACA AGCGAAGGTG ACTCGTCTTG AAGCTCTCGG TCAGCAAGTT
GCAAAAAATA ATCAATTAGA AGATCAATTT GATTTCTCTT CCGAAGTCGG TGTGGGTGGC
CTGAGTGAAT TAGGTGCCAA TATCGAGCTC GACCAGCTTA TCGCAGACAT GGATAAGTTA
GTATCACGAA TAGATAACAA TAATGTTCAA CTTTCAATAC TTGAAACAGT ATCATCTAAT
CTCCATATAG ATGAAGAACG TTATATATCT GGGCGGCCCA TCCAAAAAGG ATGGTTATCA
TCGCCCTACG GTTTACGAAA TGACCCTTTT AATGGACGGA GGACTTTGCA TAAAGGCATC
GACTTCGCCG GAAAAGAGGG AACCAATGTG GTCGCTACCG CTGGCGGCGT GATCACATGG
GCAGGCAAAA TGTTTGGCTA TGGTGAGCTT GTAGAGATAG ATCATGGAAA TGGTTTACGA
ACTCGTTATG GACACAATAA GTCTTTGTTA GTAACCGTAG GTGATGTTAT CGCCAAAGGC
GAGAATATCG CCAAAATGGG AAGTACCGGG CGCTCGACCG GACCCCATGT GCATTATGAA
GTGTTGCGGG GTGGACAGCA GATAGATCCG CAGAAATTTG TCTACCGCAA AGCAGGTTAA
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| Protein sequence | MSVTVFIQGR NGASRWQPGK RWLLLPVLLI AAGSGLYQHS AKQILQQQTN VDNERVAREA
QKNELIELKG ATEAQLAMLV THVARIQAKV TRLEALGQQV AKNNQLEDQF DFSSEVGVGG
LSELGANIEL DQLIADMDKL VSRIDNNNVQ LSILETVSSN LHIDEERYIS GRPIQKGWLS
SPYGLRNDPF NGRRTLHKGI DFAGKEGTNV VATAGGVITW AGKMFGYGEL VEIDHGNGLR
TRYGHNKSLL VTVGDVIAKG ENIAKMGSTG RSTGPHVHYE VLRGGQQIDP QKFVYRKAG
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