| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0412 |
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| Symbol | |
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| ID | 5613654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 482148 |
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| End bp | 482912 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931244 |
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| Product | polypeptide-transport-associated domain-containing protein |
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| Protein accession | YP_001472153 |
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| Protein GI | 157373553 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1589] Cell division septal protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.466864 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00145589 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGTCTTGGG CTGAGGTTGG TCAAAGGTGG AAATTGAGGC TGGTGCAGGT CGATTGGTAT
CTGTGTCTTG GGCTCCTGTT TTTGCTCTTG GTAGTAATCA GTTTATCGAT GGGAGCTTGG
AAACTTAATC TGATAGTTAA TGACGCCGAC GCATTGCCTA TCGAGGCTGT GGCAATCAGA
GGAGAGCGTG CCAGAACCTC TGATGAAGAG ATACAGGTCG CATTACAGGA TCTGATGAAG
AGAAGCTTTT TCTCGGCAGA TGTCAATCAA GTGCAGGATG CATTAGAGGC GTTGCCCTGG
GTTTACCAGG CTTCGGTACG GCGTGAATGG CCTGCAAAGT TAAAGGTATA CCTGGTTGAG
CAACAAGTCG TCGCCCATTG GAATGGAGAT GCCTGGCTCA ATATTCATGG GCAGATATTC
GATGCACCTA AAAGATCTGA TATTGGGGCT TTGCCTCTGC TTGCCGGCCC GGAAGGGCAA
TCGAAAGTGG TATTAACCAC ATATCGGCAA GTTAGCGAGT TGTTGAAGAT AAATGGTTTC
AAGTTAGACA GTCTAAGTTT GAGTCCGAGA CATGCATGGC ATGGTTCATT GGATAACGGA
ATTATGCTCG AGCTAGGCAG AGAAGATAAA ATGGCAAGGA TACAAAGATT TATCAATGTG
TATCCGACAC TGGTTAAGCA GTCAAAGCCA GTTGCCAAGG TAGATTTGCG CTACGACACC
GGATTAGCCG TAGGTTGGGA AAATGCACAG AAAGAGAGCC AGTAA
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| Protein sequence | MSWAEVGQRW KLRLVQVDWY LCLGLLFLLL VVISLSMGAW KLNLIVNDAD ALPIEAVAIR
GERARTSDEE IQVALQDLMK RSFFSADVNQ VQDALEALPW VYQASVRREW PAKLKVYLVE
QQVVAHWNGD AWLNIHGQIF DAPKRSDIGA LPLLAGPEGQ SKVVLTTYRQ VSELLKINGF
KLDSLSLSPR HAWHGSLDNG IMLELGREDK MARIQRFINV YPTLVKQSKP VAKVDLRYDT
GLAVGWENAQ KESQ
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