Gene Ssed_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0410 
SymbolmurG 
ID5611430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp479448 
End bp480545 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content49% 
IMG OID640931242 
Productundecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 
Protein accessionYP_001472151 
Protein GI157373551 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID[TIGR01133] undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00134063 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACAACCG TGAATACTGA TAAGCGTATT TTGATTATGG CCGGAGGTAC CGGCGGCCAT 
GTATTTCCTG CGCTAGCAGT CGCAAAATAC CTTTGCCAGC AAGGTTGGCA AGTCAGGTGG
TTAGGAACCG CTGAGCGTAT GGAAGCGAGG TTAGTTCCTC AGCATGGATT CGATATCGAT
TTTATCGATA TTAAAGGGGT GCGTGGAAAC GGATTGCTGC GTAAGTTGGC TGCACCTTTT
AAGGTGATAC GTTCGATCAT GCAGGCCCAG GCTGTGATTA AAGAGTTCAA GCCCGATGTG
GTCTTAGGCA TGGGAGGCTT TGCCAGTGGA CCCGGTGGCG TGGCCGCCAG ACTATCGGGG
CTCCCTTTAG TATTGCATGA GCAAAATGCG ATACCGGGAA TGACCAATAA AATTCTTGCT
CGAATTGCCA GTCAGGTTTT ATGTGCCTTC GAAGATACGT TTGACAATGT AGAGGCAGAG
GTTGTTGGAA ACCCGATAAG AGAAGAGCTT ATCGCCTTGG GCGATAGTAA TGTCGACCCC
GTTACCGATG ACGCATTAAA GGTATTAGTC GTTGGTGGAA GCTTAGGCGC TAAAGTGTTT
AACGACCTAA TGCCAAGTGT GACAGCTGCG GTGAGTAAGA CGCACTCGAT TACCGTATGG
CACCAGGTAG GTAAGGGTAA CCTTCAAGGG GTCAAGGCAG AGTACCAACA CCTTGGGCAA
GATGGCAGTG TTAATGTTGC CGAATTTATT GATGATATGG AAGCAGCGTA CCGCTGGGCC
GATGTTGTGC TGTGCCGCTC AGGGGCATTA ACCGTCTCTG AGGTGGCAGC CGTTGGCTTA
CCTAGCCTGT TAGTGCCATA TCCACATGCA GTCGACGATC ATCAAACCAA AAATGCGCAA
GTTTTGGTGC AGGCCGGGGG GGCATTTTTA CTGCCGCAGA CAATTTTAGA TGCAAATAAG
CTGATTGGAA AATTGCAAAT TTTAGCCTCT GATAGAAACG AATTAGCTCA GATGGGCCTA
CGAGCAAAAA GTGCAGCGGT ATTGGACGCA ACACAGAAAG TTGCGAGTGT CTGCATCAGA
TTAGCTGGAA AGGATTGA
 
Protein sequence
MTTVNTDKRI LIMAGGTGGH VFPALAVAKY LCQQGWQVRW LGTAERMEAR LVPQHGFDID 
FIDIKGVRGN GLLRKLAAPF KVIRSIMQAQ AVIKEFKPDV VLGMGGFASG PGGVAARLSG
LPLVLHEQNA IPGMTNKILA RIASQVLCAF EDTFDNVEAE VVGNPIREEL IALGDSNVDP
VTDDALKVLV VGGSLGAKVF NDLMPSVTAA VSKTHSITVW HQVGKGNLQG VKAEYQHLGQ
DGSVNVAEFI DDMEAAYRWA DVVLCRSGAL TVSEVAAVGL PSLLVPYPHA VDDHQTKNAQ
VLVQAGGAFL LPQTILDANK LIGKLQILAS DRNELAQMGL RAKSAAVLDA TQKVASVCIR
LAGKD