Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0401 |
Symbol | |
ID | 5612161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 469277 |
End bp | 469735 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931233 |
Product | cell division protein MraZ |
Protein accession | YP_001472142 |
Protein GI | 157373542 |
COG category | [S] Function unknown |
COG ID | [COG2001] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00242] mraZ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000156714 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTTTCGTG GGGCCAGTGC TATTAACCTT GATACAAAAG GACGGATCGC TATTCCAAAG CGCTACCGTG AGCCCCTGCA CGCTGAATTT AATAGCCAAA TAGTGATAAC CGTTGATTTT CAATCTCCCT GCCTCTTGCT CTATCCATTC GATGAATGGA GTAAGATCGA AGCAAAATTA CTACTACTCT CCGATACCCG GGCTACAGAA AGAGCCATGA AAAGGCTACT TTTGGGCTAT GCCCATGAGT GTGAGCTCGA TGGGAACGGT AGAATATTAC TACCTCCACC GCTTCGTCAA TATGCCAATT TAGAGAAGCG AGCAATGTTA GTGGGGCAGT TGAATAAGTT TGAACTTTGG GATGAAACTG CTTGGCAGAA GCAGATAGAG CAAAGCCGAG AGACGATTCA AAGCGAAGAG TTTGCTGATA ATGAACGTCT TGCCGATTTC TCACTGTGA
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Protein sequence | MFRGASAINL DTKGRIAIPK RYREPLHAEF NSQIVITVDF QSPCLLLYPF DEWSKIEAKL LLLSDTRATE RAMKRLLLGY AHECELDGNG RILLPPPLRQ YANLEKRAML VGQLNKFELW DETAWQKQIE QSRETIQSEE FADNERLADF SL
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