| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0399 |
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| Symbol | |
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| ID | 5612394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 466976 |
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| End bp | 468463 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931231 |
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| Product | glycerol kinase |
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| Protein accession | YP_001472140 |
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| Protein GI | 157373540 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0554] Glycerol kinase |
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| TIGRFAM ID | [TIGR01311] glycerol kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000252847 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCTAAAA AGTATGTGGT GGCATTAGAT CAGGGTACAA CAAGTTCAAG AGCGATCATA
TTCGATCATG ATGCCAATAT TGTTTCTGTA TCACAGCGAG AGTTTCCTCA GATTTACCCT
CAGGCCGGTT GGGTCGAACA TGATCCCATG GAGATATGGG CCTCACAGAG CTCTACCCTT
ATCGAACTGC TTGCTCGGTC CGGGATCCAT GGTAGTGAGG TCGCTGCGAT TGGGATCACC
AATCAACGTG AAACGACCGT CATCTGGGAT AAGTTAACCG GTAAACCAGT TTATAACGCT
ATTGTCTGGC AGTGTCGTCG CAGTAGTCAT ATCTGTGATG AGCTAAAAGC GCAGGGGCTG
GAAGATTATG TGCGTGAGAC AACAGGCTTA CTGCTCGACC CCTATTTTTC AGGCACTAAG
ATTAAGTGGA TCTTGGATAA CGTTGCGGGC GTCAGAGAGA GAGCAGAAAA AGGAGAGTTA
CTGTTTGGCA CTATCGATAC CTGGTTGGTT TGGAAGCTGA CCGAGGGAAA AGTGCATGTT
ACCGACCCCA CCAATGCCAG TCGTACTCTG TTATTTAATA TCCATACTCA GCAATGGGAT
AGTAAGTTAC TGGAGGCACT GAATATTCCA GAGTCCCTGC TTCCTGAAGT TAAGCCTTCC
TGTGCGGTGT ACGGTAAGAC CCGCATTGCA GGTGAAGGCG GCGAAATAAG TATTGCTGGC
ATTGCAGGCG ATCAGCAGTC AGCCTTGTTC GGACAGCTTT GTATCGATGA GGGGATGGCG
AAAAATACTT ACGGTACAGG CTGTTTCTTG TTGATGAACA CGGGTAAACA AGCCGTCAAA
TCTACCCATG GTTTGCTCAC CACTGTCGCG ATAGGTGCAG ATTGTGAAGT GAATTATGCC
TTAGAGGGCG CCGTTTTCAT GGGAGGCGCG ACGATTCAAT GGCTCAGAGA TGAACTGGGC
CTCATCAGGG ACGCACAAGA TACCGAGTAT TTTGCCTCAA AGGTGGAAGA TACTAATGGG
GTCTATTTAG TCCCGGCTTT TGTTGGCTTA GGAGCGCCAT ACTGGGATCC CAACGCTCGT
GGTGCTCTGG TTGGGTTAAC CCGTGGCTCG AATCGTAACC ATATTATCCG CGCCGCTTTG
GAAGCTATTG CTTATCAAAG CCGTGATCTG CTCGATGCCA TGGCCAAAGA TAGCGGTGTC
ATGCTCAAGC AGTTAAAGGT CGATGGTGGG GCCGTCTCTA ACGATTTTTT GATGCAGTTT
CAGGCTGACA TCACCAATGT AGAAGTACAG CGGCCTGCCA TTACTGAAAC TACGGCTATG
GGGGCGGCAT TCCTTGCAGG ATTGGCCGTG GGATTCTGGA GCTCGACCTC TGAGCTAAAA
CATAAAGCCG ATATCGAGCG CACATTTATA CCATCTATAT CAGCTGAGAA GTGTGATGAG
CTGTATTGTG GGTGGAACCG CGCCGTGACT CAAACGATTA AGAGTTGA
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| Protein sequence | MAKKYVVALD QGTTSSRAII FDHDANIVSV SQREFPQIYP QAGWVEHDPM EIWASQSSTL
IELLARSGIH GSEVAAIGIT NQRETTVIWD KLTGKPVYNA IVWQCRRSSH ICDELKAQGL
EDYVRETTGL LLDPYFSGTK IKWILDNVAG VRERAEKGEL LFGTIDTWLV WKLTEGKVHV
TDPTNASRTL LFNIHTQQWD SKLLEALNIP ESLLPEVKPS CAVYGKTRIA GEGGEISIAG
IAGDQQSALF GQLCIDEGMA KNTYGTGCFL LMNTGKQAVK STHGLLTTVA IGADCEVNYA
LEGAVFMGGA TIQWLRDELG LIRDAQDTEY FASKVEDTNG VYLVPAFVGL GAPYWDPNAR
GALVGLTRGS NRNHIIRAAL EAIAYQSRDL LDAMAKDSGV MLKQLKVDGG AVSNDFLMQF
QADITNVEVQ RPAITETTAM GAAFLAGLAV GFWSSTSELK HKADIERTFI PSISAEKCDE
LYCGWNRAVT QTIKS
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