Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0386 |
Symbol | rpmB |
ID | 5612747 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 451208 |
End bp | 451444 |
Gene Length | 237 bp |
Protein Length | 78 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640931218 |
Product | 50S ribosomal protein L28 |
Protein accession | YP_001472127 |
Protein GI | 157373527 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0227] Ribosomal protein L28 |
TIGRFAM ID | [TIGR00009] ribosomal protein L28 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00127683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000115642 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAGAG TATGCCAAGT AACTGGCAAG AAACCAATGG TTGGTAACAA CCGCTCACAC GCGAAAAACT CGACACGTCG TCGTTTTTTA CCTAACCTAC AAAACCATCG TTTTTGGTTA GAAGGCGAAA AGCGTTTCGT TAAGCTACGT ATCTCTACTA AAGGTATGCG TATCATCGAT AAGAAAGGTA TTGAAGTTGT TGTTGCTGAA CTTCGTGCCC GCGGCGAGAA GGTATAA
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Protein sequence | MSRVCQVTGK KPMVGNNRSH AKNSTRRRFL PNLQNHRFWL EGEKRFVKLR ISTKGMRIID KKGIEVVVAE LRARGEKV
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