Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0372 |
Symbol | |
ID | 5613032 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 437011 |
End bp | 438036 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640931204 |
Product | putative manganese-dependent inorganic pyrophosphatase |
Protein accession | YP_001472113 |
Protein GI | 157373513 |
COG category | [C] Energy production and conversion |
COG ID | [COG1227] Inorganic pyrophosphatase/exopolyphosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.924139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000592132 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGACTTTTC ATCGTTTGAC TCTTGTTGCT TTATCTTTAA CAGCGGCCAT GGCATTACCC TGCCAGAGCG CCGACTTAGA TCTCTCACTT AATGCACAAC CTATCTCATC CGATACGCTT TGGTTTGGCC ATACGACTCC GGATACCGAT ACTACTGTTT CGGCCATCGC GGCTGCAGAG TTTTACGGCG GACAGGCGCG CAGCACAGGT AAACTCAATA AAGAGACCCA GTTTGTATTG GACAAGCTAA ATGTAAAAAC GCCTCCACTG GCCAGGAACC TGGAAAATGC CAAGGTGGCG CTGGTTGATT TCAACCAAAC GACGCAGCTG ATGAAAGGCG TAGATCAAAA CAAGATCCAG GCTGTGATAG ACCATCATGC GTTGAGAGAC AATCCAATTT CACTGTCGGC GCCTATCAGC ATTGTTATTA AGCCTTGGGG ATCGGCGGCA ACCATCATTG CCGATGATGC ATTAGATCAT GGAAAAACTA TCTCAAAAAC CATGGCGGGT CTTCTGCTTG CGGGTATCTT GTCGGATACG CTAAATCTGA AATCGGTGAC CACAACCCAG CGTGATAGAG AGCTGGTTAA GACACTTTCG GCAAAAGCCA ACCTCAACGC AGATGATTTT GCTCAAGGCA TGTTTAAGGC TAAATCTGAC CTGTCGGATG TCAGCGCATA TGACATAGTC GTGGGCGACT ATAAGAACTA TATAGTCAAT GGGCAAGATA TTGGTTTTGG TGTGGCAGAA GTTTTGGATT CAAGCGAGCT ACTTGGGCGC GTAGATGAGC TACGAGGTGC CATGGCAAAG GCCCGTAAGA ATCAGAAGCG GGAACAGCTC TTCTTTGCAA TCGTAGATAT GCAGAAAAAG ACTGCCTATG TACTCACCAA CAGCGATAAA GAGACTAAGA CAGCCAGTAA AGCCTATGGG GTGAAGCAAA ATAGTCAGGG CATTTTTGTA CTGGAAGATA CCCTATCGCG TAAGAGACAG ATGATGCCGG CAATTAAGAA AGCGTTGGCT GACTAA
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Protein sequence | MTFHRLTLVA LSLTAAMALP CQSADLDLSL NAQPISSDTL WFGHTTPDTD TTVSAIAAAE FYGGQARSTG KLNKETQFVL DKLNVKTPPL ARNLENAKVA LVDFNQTTQL MKGVDQNKIQ AVIDHHALRD NPISLSAPIS IVIKPWGSAA TIIADDALDH GKTISKTMAG LLLAGILSDT LNLKSVTTTQ RDRELVKTLS AKANLNADDF AQGMFKAKSD LSDVSAYDIV VGDYKNYIVN GQDIGFGVAE VLDSSELLGR VDELRGAMAK ARKNQKREQL FFAIVDMQKK TAYVLTNSDK ETKTASKAYG VKQNSQGIFV LEDTLSRKRQ MMPAIKKALA D
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