Gene Ssed_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0372 
Symbol 
ID5613032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp437011 
End bp438036 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content47% 
IMG OID640931204 
Productputative manganese-dependent inorganic pyrophosphatase 
Protein accessionYP_001472113 
Protein GI157373513 
COG category[C] Energy production and conversion 
COG ID[COG1227] Inorganic pyrophosphatase/exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.924139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000592132 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACTTTTC ATCGTTTGAC TCTTGTTGCT TTATCTTTAA CAGCGGCCAT GGCATTACCC 
TGCCAGAGCG CCGACTTAGA TCTCTCACTT AATGCACAAC CTATCTCATC CGATACGCTT
TGGTTTGGCC ATACGACTCC GGATACCGAT ACTACTGTTT CGGCCATCGC GGCTGCAGAG
TTTTACGGCG GACAGGCGCG CAGCACAGGT AAACTCAATA AAGAGACCCA GTTTGTATTG
GACAAGCTAA ATGTAAAAAC GCCTCCACTG GCCAGGAACC TGGAAAATGC CAAGGTGGCG
CTGGTTGATT TCAACCAAAC GACGCAGCTG ATGAAAGGCG TAGATCAAAA CAAGATCCAG
GCTGTGATAG ACCATCATGC GTTGAGAGAC AATCCAATTT CACTGTCGGC GCCTATCAGC
ATTGTTATTA AGCCTTGGGG ATCGGCGGCA ACCATCATTG CCGATGATGC ATTAGATCAT
GGAAAAACTA TCTCAAAAAC CATGGCGGGT CTTCTGCTTG CGGGTATCTT GTCGGATACG
CTAAATCTGA AATCGGTGAC CACAACCCAG CGTGATAGAG AGCTGGTTAA GACACTTTCG
GCAAAAGCCA ACCTCAACGC AGATGATTTT GCTCAAGGCA TGTTTAAGGC TAAATCTGAC
CTGTCGGATG TCAGCGCATA TGACATAGTC GTGGGCGACT ATAAGAACTA TATAGTCAAT
GGGCAAGATA TTGGTTTTGG TGTGGCAGAA GTTTTGGATT CAAGCGAGCT ACTTGGGCGC
GTAGATGAGC TACGAGGTGC CATGGCAAAG GCCCGTAAGA ATCAGAAGCG GGAACAGCTC
TTCTTTGCAA TCGTAGATAT GCAGAAAAAG ACTGCCTATG TACTCACCAA CAGCGATAAA
GAGACTAAGA CAGCCAGTAA AGCCTATGGG GTGAAGCAAA ATAGTCAGGG CATTTTTGTA
CTGGAAGATA CCCTATCGCG TAAGAGACAG ATGATGCCGG CAATTAAGAA AGCGTTGGCT
GACTAA
 
Protein sequence
MTFHRLTLVA LSLTAAMALP CQSADLDLSL NAQPISSDTL WFGHTTPDTD TTVSAIAAAE 
FYGGQARSTG KLNKETQFVL DKLNVKTPPL ARNLENAKVA LVDFNQTTQL MKGVDQNKIQ
AVIDHHALRD NPISLSAPIS IVIKPWGSAA TIIADDALDH GKTISKTMAG LLLAGILSDT
LNLKSVTTTQ RDRELVKTLS AKANLNADDF AQGMFKAKSD LSDVSAYDIV VGDYKNYIVN
GQDIGFGVAE VLDSSELLGR VDELRGAMAK ARKNQKREQL FFAIVDMQKK TAYVLTNSDK
ETKTASKAYG VKQNSQGIFV LEDTLSRKRQ MMPAIKKALA D