| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0371 |
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| Symbol | |
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| ID | 5613271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 435056 |
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| End bp | 436882 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931203 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472112 |
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| Protein GI | 157373512 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00495548 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.000000000101633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGATCAC ACCTACTCGC ACTATCTGTT CTACCGTTTG CCTTTAGCGC TATCGCTTCA
AGTAGTTTGG ATGCACTTTA TGGTCCTATC ATGCCGCCAG CCTACATTAA GGCTTACGAA
GTAAATAACC ATCATCAGAT CGCATTGAAT CCCTACCTGC AAGTAGGTAA TGCTGACAAC
CCTATCATCC TGGACGAAGG GGAAGGGTAT GTTTGGGTTA TCGACAAGGA TGGCAACTTT
GTTATTGCCC CTGAGGTGAC GTCTCCCTGG GGAAGGAAGT ACAAAGAGGG CATGATGAGA
ATCGAGGATG GTAAGCCTAA AAAATGGGGA TACAAAGAGA AGTACGGACA CACTGCCTTA
ATCGGTGGAA GTAAGGCTCG TATTGGTGGT GAGCTGGAGA TGGAAAATGG TCAATGGATA
ATGAATAACA AATCCGGCCG TTACAACAAG CGCCGTCCAG GTCGCACCGA AGAGGCAATG
CATAATGCGG GTGACCTGCT GATCGCTATC GCACCACAAA TTGCCGAATT AGATTATGAA
TATTTAAAGG ATTATGGCCC GGCTAAACCT ATCTCATTAA AGGTGATGAA AGATATCGAG
TGGCACTACA TGATCGATGA TGACTATTTT TGGGATGCGG AAGGAAAGAA ACTAGGCAAA
GCATTTGTCG AGAAGACCCC CTTTATCGAT TGGCGAGCCA AGGTCAAGTT TAAAGAGGGG
TTCTATATGG ATACCCAGGA CCGCTTCCTG AAGAGTCAGG ATGAGATTTT CCGGGTTCGT
TTGGACGTCA GTAAGCCGCG TAAATCAAAA TTTACCCATA AGCTTCGCTC ATCGGATATT
ACCGACCTGA AACCAATGAT CGATGGTGAA GGAGAGGTGG ATGTTTCTAT CGGTGGCGAC
CTATACAGCC TTGCTACCGA TACTGGTTTC AACTTCTTGA ACTTCGATTT CTATAATGCT
AATTCTGAAG AAATTTTCGA ATACCTGATG TTTGCAGATA GGCGTGCATA CAAGCAGATG
ACGCCACTGA TGCGTTATGG TGCCGACAAG GTGTTAAAGA CCGACATCAT GCGTCAATCT
AAGTACAAAG GTTGGCTCAA TACCGGTCCC TTTGCCGGCC ATGAAATTGA AATTCAGATC
TGGAAAAAGA TCATCGAGCC CGGAAAGTTC GGTAAGGAGG GCAAGTACAG CGAGCCTCTA
CTGCTGGAGA TAGGCTTCGA AGGTAAAACC AAGAACCGCG AAGAGCTCAA CAAGTTAAAC
ACCTGGCTAT ACGGTAAGTT GAAGAGCGCA GATCTACTGG CTAAAGATCA GTCTCAATCT
AAGACTGAGA TTGCTTTTGC AGTCAGTAAG CGCTTCGATG CCAAGAAAAC CCCTAAGCTT
CCTCAAGTCG CTCCAGAGGT TAAGATTGCC GCTATCGACG GGATCAAGAC TCGTAATCTC
GATGGCACTA TCAATGTAAA GACTAACGGT GATAAGCAAG TAATCGCAGG TCAGAAAGGT
GTTCAGGGCG AGGTGTACCA AACAGCCCTG AATGGTAAGC CGCTTTCGGT TGTCGTGTTA
GGTGGTAAGG GCAACATAAA GCAGGCTTTA GCAAAAGTGG TTGGTGCTAA AGGCGAGCTG
TTGGTTGCTG TGGCTGCAGG CTCTTCTCTG GATAACCCTA AAAGCCGGGC AAAACTTGCC
GCTAAGTTAG ATGGTGGTAA TGCACTTAAA GGTTATGAGT TACTGGGTGA TACAGCAAGG
GATTACTTAA AGCCTATCAT CAAGAAAAAT ATGGATATTA AGGCTCGCAG TAACCAGCAT
TACTACTGGT CAGGCGTCGC AGAATAA
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| Protein sequence | MRSHLLALSV LPFAFSAIAS SSLDALYGPI MPPAYIKAYE VNNHHQIALN PYLQVGNADN
PIILDEGEGY VWVIDKDGNF VIAPEVTSPW GRKYKEGMMR IEDGKPKKWG YKEKYGHTAL
IGGSKARIGG ELEMENGQWI MNNKSGRYNK RRPGRTEEAM HNAGDLLIAI APQIAELDYE
YLKDYGPAKP ISLKVMKDIE WHYMIDDDYF WDAEGKKLGK AFVEKTPFID WRAKVKFKEG
FYMDTQDRFL KSQDEIFRVR LDVSKPRKSK FTHKLRSSDI TDLKPMIDGE GEVDVSIGGD
LYSLATDTGF NFLNFDFYNA NSEEIFEYLM FADRRAYKQM TPLMRYGADK VLKTDIMRQS
KYKGWLNTGP FAGHEIEIQI WKKIIEPGKF GKEGKYSEPL LLEIGFEGKT KNREELNKLN
TWLYGKLKSA DLLAKDQSQS KTEIAFAVSK RFDAKKTPKL PQVAPEVKIA AIDGIKTRNL
DGTINVKTNG DKQVIAGQKG VQGEVYQTAL NGKPLSVVVL GGKGNIKQAL AKVVGAKGEL
LVAVAAGSSL DNPKSRAKLA AKLDGGNALK GYELLGDTAR DYLKPIIKKN MDIKARSNQH
YYWSGVAE
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