Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0367 |
Symbol | |
ID | 5613413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 430127 |
End bp | 431479 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640931199 |
Product | phosphate-selective porin O and P |
Protein accession | YP_001472108 |
Protein GI | 157373508 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3746] Phosphate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000629445 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000662994 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCTAAAG CTAATGTTTC ACGAATCTCA ATTGTTGCGC TTGCTGTTTC TGCTTCACTA CTTTGTTTCT CTGCCAATGC TGTCGCGTCT GAAAAAGAGC GCATTAACGA GTTAGAGCAG CGACTGGATA TGCTAGAAGT TGAGCTTATC GAAGCTAAAG ATGCCGCTTC ACAGGTTGAC CGAGTTAAAT TCTCCAAGAG TTCACCAAGT CCTGAACTTA TCTCTAAAGA TGGTCGCTCG ACTCTGGAGT TTAAGGCTAG AATCCAGACT GATTATGTTA GTGCCGATGA GTTGTATACC GGTAGCAAGC GCGAATACGA GGATTCATTT AATGAAGCCA GTATCAGACG CATTCGGTTT GGTTTAGAAG GCTATTTCTC AAATGTATGG GAATACGAAT TAGAATTTGA TTTTGATGGT GTTGCAGAAG TTGAAGTTAA GGATGCGAAC ATTGCTTATA AGGGGTGGGA TAACTCTCAG CTTACTTTAG GTTTCCAAAA GTATGCCTTT GGTTTAGAGG CCACAGGAAG CTCTGCTCAC TTGGCATTCT TAGAGCGTGC AGCTACAGAT ACCTTCGCTC CCGATCGTGC ACTCGGTGCT CAATGGCGTT ATGTAGGCAA CAATTATAAC GTCACTTTAG GTTATGGAGT TAACGCAGGG TTCGATGATG ACGATTTGAA CTTTAAACAA GATATAGTCA ATGCTCGTTT TACTACTGCA CTTATCGATA GTGGTGAGCA TCTGCTTCAT CTCGGTGCCA GTGCACTGTT TGTATATAAT AACGAAGCGG TTGAAGAGAC ACGTTATCGT GCGAGACCAA ATACTAAAGC CAGTGGAAGA ACGATTGATA CAGGTAAGTT TGATGCCGAG TCACTTCAAC ATTATGGCGC CGAGATCGCA TACCAGTACA GTAATGTTCT TCTCCAAGCG GAATATGCAA CAGCGTTAGC CGATCAAGCC GATGATTCTG AGCCAGAAGT GACGGTAGAT GCATACTATC TCCAAGCCAT CTATACCCTA ACCGGCGAAG CTTGGAAATA TAAAGGGAAA AGTGGCAAGT TCAAGACGGT TAAACCTGAC AATGCTATCT CTGCCGGCGG TTATGGTGCA TGGGAACTGG CAGTAAGAGT GGACCAAGCC AATTTCGACG ATGTTGAAGC CGGTATATAT GGTGGTAAGA AAACGGATTA CGTTCTTGGG GTTAACTGGT ACCTGGAGAA CAATTTAAAA GCTCAATTTA ATTATGTGCA TACGACTGCC GATTACAAGA AGCCCTATGA AGATATCAAT GGCGATATGA TGTATGACCA AGATGCTAAT ATTTTCCAAG CTCGTTTGCA GTTTGCATTC TAA
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Protein sequence | MAKANVSRIS IVALAVSASL LCFSANAVAS EKERINELEQ RLDMLEVELI EAKDAASQVD RVKFSKSSPS PELISKDGRS TLEFKARIQT DYVSADELYT GSKREYEDSF NEASIRRIRF GLEGYFSNVW EYELEFDFDG VAEVEVKDAN IAYKGWDNSQ LTLGFQKYAF GLEATGSSAH LAFLERAATD TFAPDRALGA QWRYVGNNYN VTLGYGVNAG FDDDDLNFKQ DIVNARFTTA LIDSGEHLLH LGASALFVYN NEAVEETRYR ARPNTKASGR TIDTGKFDAE SLQHYGAEIA YQYSNVLLQA EYATALADQA DDSEPEVTVD AYYLQAIYTL TGEAWKYKGK SGKFKTVKPD NAISAGGYGA WELAVRVDQA NFDDVEAGIY GGKKTDYVLG VNWYLENNLK AQFNYVHTTA DYKKPYEDIN GDMMYDQDAN IFQARLQFAF
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