Gene Ssed_0367 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0367 
Symbol 
ID5613413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp430127 
End bp431479 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content43% 
IMG OID640931199 
Productphosphate-selective porin O and P 
Protein accessionYP_001472108 
Protein GI157373508 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3746] Phosphate-selective porin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000629445 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000662994 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTAAAG CTAATGTTTC ACGAATCTCA ATTGTTGCGC TTGCTGTTTC TGCTTCACTA 
CTTTGTTTCT CTGCCAATGC TGTCGCGTCT GAAAAAGAGC GCATTAACGA GTTAGAGCAG
CGACTGGATA TGCTAGAAGT TGAGCTTATC GAAGCTAAAG ATGCCGCTTC ACAGGTTGAC
CGAGTTAAAT TCTCCAAGAG TTCACCAAGT CCTGAACTTA TCTCTAAAGA TGGTCGCTCG
ACTCTGGAGT TTAAGGCTAG AATCCAGACT GATTATGTTA GTGCCGATGA GTTGTATACC
GGTAGCAAGC GCGAATACGA GGATTCATTT AATGAAGCCA GTATCAGACG CATTCGGTTT
GGTTTAGAAG GCTATTTCTC AAATGTATGG GAATACGAAT TAGAATTTGA TTTTGATGGT
GTTGCAGAAG TTGAAGTTAA GGATGCGAAC ATTGCTTATA AGGGGTGGGA TAACTCTCAG
CTTACTTTAG GTTTCCAAAA GTATGCCTTT GGTTTAGAGG CCACAGGAAG CTCTGCTCAC
TTGGCATTCT TAGAGCGTGC AGCTACAGAT ACCTTCGCTC CCGATCGTGC ACTCGGTGCT
CAATGGCGTT ATGTAGGCAA CAATTATAAC GTCACTTTAG GTTATGGAGT TAACGCAGGG
TTCGATGATG ACGATTTGAA CTTTAAACAA GATATAGTCA ATGCTCGTTT TACTACTGCA
CTTATCGATA GTGGTGAGCA TCTGCTTCAT CTCGGTGCCA GTGCACTGTT TGTATATAAT
AACGAAGCGG TTGAAGAGAC ACGTTATCGT GCGAGACCAA ATACTAAAGC CAGTGGAAGA
ACGATTGATA CAGGTAAGTT TGATGCCGAG TCACTTCAAC ATTATGGCGC CGAGATCGCA
TACCAGTACA GTAATGTTCT TCTCCAAGCG GAATATGCAA CAGCGTTAGC CGATCAAGCC
GATGATTCTG AGCCAGAAGT GACGGTAGAT GCATACTATC TCCAAGCCAT CTATACCCTA
ACCGGCGAAG CTTGGAAATA TAAAGGGAAA AGTGGCAAGT TCAAGACGGT TAAACCTGAC
AATGCTATCT CTGCCGGCGG TTATGGTGCA TGGGAACTGG CAGTAAGAGT GGACCAAGCC
AATTTCGACG ATGTTGAAGC CGGTATATAT GGTGGTAAGA AAACGGATTA CGTTCTTGGG
GTTAACTGGT ACCTGGAGAA CAATTTAAAA GCTCAATTTA ATTATGTGCA TACGACTGCC
GATTACAAGA AGCCCTATGA AGATATCAAT GGCGATATGA TGTATGACCA AGATGCTAAT
ATTTTCCAAG CTCGTTTGCA GTTTGCATTC TAA
 
Protein sequence
MAKANVSRIS IVALAVSASL LCFSANAVAS EKERINELEQ RLDMLEVELI EAKDAASQVD 
RVKFSKSSPS PELISKDGRS TLEFKARIQT DYVSADELYT GSKREYEDSF NEASIRRIRF
GLEGYFSNVW EYELEFDFDG VAEVEVKDAN IAYKGWDNSQ LTLGFQKYAF GLEATGSSAH
LAFLERAATD TFAPDRALGA QWRYVGNNYN VTLGYGVNAG FDDDDLNFKQ DIVNARFTTA
LIDSGEHLLH LGASALFVYN NEAVEETRYR ARPNTKASGR TIDTGKFDAE SLQHYGAEIA
YQYSNVLLQA EYATALADQA DDSEPEVTVD AYYLQAIYTL TGEAWKYKGK SGKFKTVKPD
NAISAGGYGA WELAVRVDQA NFDDVEAGIY GGKKTDYVLG VNWYLENNLK AQFNYVHTTA
DYKKPYEDIN GDMMYDQDAN IFQARLQFAF