Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0365 |
Symbol | |
ID | 5613411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 428039 |
End bp | 428509 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640931197 |
Product | adenylate cyclase |
Protein accession | YP_001472106 |
Protein GI | 157373506 |
COG category | [S] Function unknown |
COG ID | [COG2954] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0254785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000318495 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGGCACAGG AAATTGAACG TAAATATCTG GTAAAAAATG ATAGCTTTAA AGGTCAGGCC GTAAAGGCTG TACGCATTAT TCAAGGTTAT TTGAGTAGTG TTCCTGAGCG TACAGTTAGG GTGCGTATTA AGGGAGATAA AGGTTTCTTG ACTATCAAGG GAATAGGCAA TGAATCGGGT GCTTCCCGTT ATGAATGGGA AGAGCAGATC CCAACGGAAG AGGCTGAAGA GTTGCTGAAA ATCTGTGAGC CTGGGGTTAT CGATAAGACG CGTTATATCA TTGAGCATGC ATCGCTTATC TTTGAAGTCG ATGAGTTTTA CGGCAGTAAC GAAGGCTTAA CTGTCGCAGA GGTTGAGCTC ATCGATGAAG CACAGGCCAT CGATAAACCT GAGTGGGTAG GTGAAGAGGT GACTGGAGAC GTTAAGTACT ACAACTCTAT GCTTATGAAG CAACCTTATA CTCAGTGGTA A
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Protein sequence | MAQEIERKYL VKNDSFKGQA VKAVRIIQGY LSSVPERTVR VRIKGDKGFL TIKGIGNESG ASRYEWEEQI PTEEAEELLK ICEPGVIDKT RYIIEHASLI FEVDEFYGSN EGLTVAEVEL IDEAQAIDKP EWVGEEVTGD VKYYNSMLMK QPYTQW
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