Gene Ssed_0365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0365 
Symbol 
ID5613411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp428039 
End bp428509 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID640931197 
Productadenylate cyclase 
Protein accessionYP_001472106 
Protein GI157373506 
COG category[S] Function unknown 
COG ID[COG2954] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0254785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000318495 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCACAGG AAATTGAACG TAAATATCTG GTAAAAAATG ATAGCTTTAA AGGTCAGGCC 
GTAAAGGCTG TACGCATTAT TCAAGGTTAT TTGAGTAGTG TTCCTGAGCG TACAGTTAGG
GTGCGTATTA AGGGAGATAA AGGTTTCTTG ACTATCAAGG GAATAGGCAA TGAATCGGGT
GCTTCCCGTT ATGAATGGGA AGAGCAGATC CCAACGGAAG AGGCTGAAGA GTTGCTGAAA
ATCTGTGAGC CTGGGGTTAT CGATAAGACG CGTTATATCA TTGAGCATGC ATCGCTTATC
TTTGAAGTCG ATGAGTTTTA CGGCAGTAAC GAAGGCTTAA CTGTCGCAGA GGTTGAGCTC
ATCGATGAAG CACAGGCCAT CGATAAACCT GAGTGGGTAG GTGAAGAGGT GACTGGAGAC
GTTAAGTACT ACAACTCTAT GCTTATGAAG CAACCTTATA CTCAGTGGTA A
 
Protein sequence
MAQEIERKYL VKNDSFKGQA VKAVRIIQGY LSSVPERTVR VRIKGDKGFL TIKGIGNESG 
ASRYEWEEQI PTEEAEELLK ICEPGVIDKT RYIIEHASLI FEVDEFYGSN EGLTVAEVEL
IDEAQAIDKP EWVGEEVTGD VKYYNSMLMK QPYTQW