| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0329 |
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| Symbol | |
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| ID | 5610025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 380531 |
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| End bp | 382606 |
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| Gene Length | 2076 bp |
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| Protein Length | 691 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931161 |
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| Product | ATP-dependent DNA helicase RecG |
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| Protein accession | YP_001472070 |
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| Protein GI | 157373470 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0231565 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAGAC TCGACCTTGT TCCCGTAACT GAGCTTAAAG GCGTTGCCAA GAAGATGGCC
GAACGCTTGG CTAAGCTCGG CATTCATACG GTACAGGATC TGCTGTTTCA CCTGCCCCTG
CGTTACGAAG ATCGCACCCA GATCTATCCC ATCGCCTCAC TTTATCCTGG TAACTACGGT
ACAATCGAAG CCGTCATTCA ATCCAGCCAG ATTATTCAGG GCCGCAAGCG CATGCTGACC
TGTACCGTGA GAGATGACAC CGGCAGCCTC ACCCTCAGAT TCTTCAACTT CTCTGTCGCA
CAAAAAAATG GATTAGAGAA TGGATTAACC ATTCGCGCCT ATGGCGAAAT TCGCCGTGGA
AAACATCAGG CAGAGATCAT TCATCCGGAA TATAAGCTGG TACAGACCAA TAGCGACCTT
CCCTTGAGCG ATACCCTCAC GCCAGTCTAT CCGACAACCG AAGGCCTCAA ACAAGCCAGC
TGGATAAAGC TGACGGAGCA AGCCTTAGCC CTGCTCGAAG AGGGAGGTCT GCAGGAGTTG
ATACCGCCGG AGCTTCAGCC CAATAACTTG AGCTTAAAAG CTGCTTTAAT GCTGTTGCAT
CGACCTCATA ACGGCGTCAA CCTATTTGAA CTCGAACAAG GCACTCACCC GGCGCAACAG
AGGTTAATTC AAGAGGAGTT GCTGGCCCAT AACCTAAGTA TGTTGAAGCT GCGTCAACGC
AGTAATCGGG ACAAGGCCGT CTTAATGCCT GCATCGGGGC AACTGCTTAA TCCATTTTTG
AAATCGCTTC CCTTTAAGCC AACCGGAGCC CAACAAAGAG TCGGAGCAGA TATCTCGACG
GATCTGGAGA AGCCATTTCC TATGATGCGT CTCGTTCAGG GCGATGTTGG CTCAGGAAAA
ACCATAGTCG CCGCCTTGGC CGCCCTGCAG GCGATTGAAA ATGGTTACCA GGTCGCCATG
ATGGCTCCGA CCGAGCTCCT TGCGGAGCAA CATGCCGAGA ACTTTACTCA ATGGTTTGAG
CCCCTGGGAC TCAAAGTTGG CTGGTTGGCA GGAAAATTAA AAGGAAAGGC GAGAACACAA
TCTCTGATGG ATATTGAGAG TGGTGAAGCC AATATGGTGA TAGGTACTCA CGCCATCTTT
CAAGAGAAGG TCACCTTTAA TAAACTGGCC TTGATCATCA TAGATGAACA ACACAGATTT
GGCGTTCATC AACGTTTAGG ACTCAGGGAG AAAGGGATAG CCCAAGGGTT CCATCCCCAT
CAGTTGATCA TGACCGCAAC CCCCATTCCA CGAACATTGG CAATGACGGC ATATGCAGAC
TTAGATACTT CGGTGATTGA TGAGCTGCCA CCCGGGCGAA CGCCGGTTGC TACCGTGGCC
GTGTCGGACT CGAGGCGCAA CGAAGTGATC GAAAGAGTCA GACAAGCCGC CACTAACGAT
GGCAGACAGG CTTATTGGGT CTGCACCTTA ATTGAAGAGT CAGAGGTACT CGAGTGCCAA
GCCGCTGAAG ATACCGCCGA AGAGCTTAGG CTCATGCTCA CAGAGCTCAA GGTAGGCTTG
GTTCACGGCC GCATGAAGTC CGCCGAGAAG CAAGCCATTA TGGCCGAGTT CAAGGCCGGC
AACCTGAATC TGTTAGTCGC CACCACCGTC ATCGAAGTGG GAGTCGATGT ACCCAATGCC
AGCTTGATGA TCATCGAAAA CCCTGAGCGA TTAGGTTTAG CCCAACTGCA CCAGCTTAGG
GGCCGCGTCG GCCGGGGCGC GGTGGCCAGC CACTGCGTAC TTATGTATAA AGCCCCACTC
TCGCCCAGCG CCACCAAGCG ATTAGGTGTG CTCAGAGACA GTAACGATGG CTTTATCATT
GCCCAAAAAG ATCTTGAGAT CAGAGGTCCC GGTGAGGTGC TAGGCACTAA GCAAACAGGA
ATTGCCGATA TGAAAATCGC CGATCTCATC CGAGATCAGG CCCTTATTCC TCATATTCAA
AAACTGGCCG TTCACCTCAT GCAGCAAGCG CCGGACAATG TCGATGGTAT TGTGCAGCGC
TGGCTAGGCG ATCGAGAGCA GTTTGTGCAG GCATAA
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| Protein sequence | MNRLDLVPVT ELKGVAKKMA ERLAKLGIHT VQDLLFHLPL RYEDRTQIYP IASLYPGNYG
TIEAVIQSSQ IIQGRKRMLT CTVRDDTGSL TLRFFNFSVA QKNGLENGLT IRAYGEIRRG
KHQAEIIHPE YKLVQTNSDL PLSDTLTPVY PTTEGLKQAS WIKLTEQALA LLEEGGLQEL
IPPELQPNNL SLKAALMLLH RPHNGVNLFE LEQGTHPAQQ RLIQEELLAH NLSMLKLRQR
SNRDKAVLMP ASGQLLNPFL KSLPFKPTGA QQRVGADIST DLEKPFPMMR LVQGDVGSGK
TIVAALAALQ AIENGYQVAM MAPTELLAEQ HAENFTQWFE PLGLKVGWLA GKLKGKARTQ
SLMDIESGEA NMVIGTHAIF QEKVTFNKLA LIIIDEQHRF GVHQRLGLRE KGIAQGFHPH
QLIMTATPIP RTLAMTAYAD LDTSVIDELP PGRTPVATVA VSDSRRNEVI ERVRQAATND
GRQAYWVCTL IEESEVLECQ AAEDTAEELR LMLTELKVGL VHGRMKSAEK QAIMAEFKAG
NLNLLVATTV IEVGVDVPNA SLMIIENPER LGLAQLHQLR GRVGRGAVAS HCVLMYKAPL
SPSATKRLGV LRDSNDGFII AQKDLEIRGP GEVLGTKQTG IADMKIADLI RDQALIPHIQ
KLAVHLMQQA PDNVDGIVQR WLGDREQFVQ A
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