| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0303 |
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| Symbol | |
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| ID | 5609864 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 357624 |
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| End bp | 358577 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931135 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001472044 |
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| Protein GI | 157373444 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.136921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000724051 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTAGCC ACTTACCGGC ATTTATTCGC CGTGACTGGT TGGATGTTGG TGACGGGCAT
GTGCTGCATC TGGCGCAGCA TGGCAACCCG GATGGGATCC CGCTGCTCTT CCTTCATGGG
GGCCCGGGGG GGGGATGTGC TGTAGAAGAC CTCAGGCTTT TCGATAGAGA CACATTTCAT
ATTTTTTTGC TGGATCAAAG AGGGGCCGGA CGTTCCAAAC CACATGGTGA GCTGAAGCAT
AACGACTTGC TGCACCTGTT GGGCGATATC GAAAGAGTGC GTTTATGGCT CAATATTCCG
GCCTGGTGTG TCGTGGGGGG CTCATTTGGT GCGACATTGG GATTTATCTA TAGTTGTCTA
TATCCTCAAA GAGTGCTGTC ACAGGTGCTT TGGGGGCTAT TTATCCCCAA TGAAGAGGGG
GCTAACTGGC TGTATGGTAA TCAGGGGGCC GCAACCCTAT TCCCACAGGA CTATTTAGAG
TTTACCGCCC TGGCCCCTTT CTCGGCTAAG ATCGATACGC TTTTTAAACG GTATCAATCT
GGCTTTCTCG ACCCGGATGT CGACACACGC CTCGAGTATG TGCGTGGCTG GTTGAAGTGG
GAGTTGGCAC TCGCTCTTCC GGGAGCCGAA CTGCCGGAGT CGGGTACCCC TTTGGCGAAG
AGTCTGGCCG AAATAGAGCT GCATTATGCC AGTCAGCAAT ACTTCGGTGC CTATGCACTG
ATGCGTGAAA TGGCGTGTGG AATAAAGGCG GATACGGTGA TACTGCAAGG CGAGATGGAC
TGGGTTTGCC CCTCTGTTAT CGTTGAGAAG TTTTTAGAAG AGTTTGGCTC CGGTGATATG
AAATATACTC TTATCAAAGG CGGGTATCAT GCGCTGGCCA ATGATAAGAT GTTTCTGGAA
GTCGTCTATG CCGTACAGGA AATGGCTAAT AATATGAGGG AAATAGATAA ATGA
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| Protein sequence | MSSHLPAFIR RDWLDVGDGH VLHLAQHGNP DGIPLLFLHG GPGGGCAVED LRLFDRDTFH
IFLLDQRGAG RSKPHGELKH NDLLHLLGDI ERVRLWLNIP AWCVVGGSFG ATLGFIYSCL
YPQRVLSQVL WGLFIPNEEG ANWLYGNQGA ATLFPQDYLE FTALAPFSAK IDTLFKRYQS
GFLDPDVDTR LEYVRGWLKW ELALALPGAE LPESGTPLAK SLAEIELHYA SQQYFGAYAL
MREMACGIKA DTVILQGEMD WVCPSVIVEK FLEEFGSGDM KYTLIKGGYH ALANDKMFLE
VVYAVQEMAN NMREIDK
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