| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0292 |
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| Symbol | glnA |
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| ID | 5611526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 343643 |
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| End bp | 345052 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931124 |
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| Product | glutamine synthetase |
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| Protein accession | YP_001472033 |
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| Protein GI | 157373433 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0174] Glutamine synthetase |
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| TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000978153 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCAGCTG AATCAGTTTT ACAACAACTC GAAGAATTAG AAGTTAAGTT TGTTGATTTG
CGTTTTACCG ATACGATAGG TAAAGAGCAA CACGTTTCCA TCCCAAGCCA TCAGGTTGAT
GCTGACTTTT TCGAAGACGG CAAGATGTTT GACGGTTCTT CAATATCAGG TTGGAAAGGC
ATTAACGAAT CAGACATGGT ATTGATGCCT GATGCAGCAA GTTTCGTACT TGATCCTTTC
ACAGCTGAAA CCACCGCGAA CATTCGTTGT GACATTTTAA ACCCTGGCAC ATTGACAGGT
TACAACCGTG ACCCTCGTTC GATTGCGAAA AAAGCCGAAG AGTACTTACG CTCTACAGGT
ATTGCAGACA CTGTATTGAT TGGTCCAGAG CCAGAGTTCT TCCTATTCGA CGACGTTAAA
TACGGCGCCG ACATGTCAGG TTGTTTCTAC AAGGTAGATG CAGAAGAAGC TTCTTGGAAC
TCAGGCACTC ATTACGATGA AGGCAACACG GGTCATCGTC CCGGCGTCAA AGGTGGTTAC
TTCCCTGTCG CTCCTGTTGA CTCTTCACAA GACCTACGTT CTGCAATGTG TCTCGTTCTG
GAAGAGATGG GTCAGGTTGT TGAAGCGCAT CACCACGAAG TGGCGACTGC CGGTCAAAAC
GAAATTGCGA CTCGCTTTAA TACGCTTACG CTAAAGGCCG ATGAAGTTCA GGTACTTAAG
TATGTTATCC ATAATGTTGC TCACGCTTAC GGTAAGACAG CGACCTTTAT GCCTAAGCCG
ATCGTTGGTG ATAACGGTAG CGGCATGCAC GTTCACCAAT CTCTGGCGAA AGACGGTGTG
AACCTATTTG CCGGTGACAA GTACGGCGGA TTGAGCGAGA TGGCCCTGTT CTACATTGGT
GGTATTATCA AGCATGCGCG TGCAATCAAC GCTTTTGCTA ACCCATCAAC TAACTCATAC
AAGCGTCTTA TCCCACATTT TGAAGCGCCG GTAATGCTTG CATATTCTGC CGCAAACCGT
TCAGCTTCAA TCCGTATCCC AATGGTACCA AGTGCGAAAG GACGTCGTAT CGAGCTTAGA
TTCGGTGATC CAATGGCTAA CCCATACCTG GCATTCTCTG CAATGCTAAT GGCTGGCCTT
GACGGTATTC AAAACAAGAT CCACCCAGGT GAAGCGATGG ATAAAGATCT TTATGATCTA
CCTCCTGAAG AAGCTGCGGA GATCCCAACA GTTGCAACGT CACTGGAAAA TGCACTCGAG
TGTCTGGATG CTGACCGTGA GTTCCTGACT CGTGGCGAAG TATTCTGTAA TGACTTCATC
GATTCTTATA TCGCACTTAA GTCTGCCGAT GTTGAGCGCG TAAACCAAAC GACTCACCCA
GTTGAATTTG AGCTTTATTA CAGCTTGTAA
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| Protein sequence | MSAESVLQQL EELEVKFVDL RFTDTIGKEQ HVSIPSHQVD ADFFEDGKMF DGSSISGWKG
INESDMVLMP DAASFVLDPF TAETTANIRC DILNPGTLTG YNRDPRSIAK KAEEYLRSTG
IADTVLIGPE PEFFLFDDVK YGADMSGCFY KVDAEEASWN SGTHYDEGNT GHRPGVKGGY
FPVAPVDSSQ DLRSAMCLVL EEMGQVVEAH HHEVATAGQN EIATRFNTLT LKADEVQVLK
YVIHNVAHAY GKTATFMPKP IVGDNGSGMH VHQSLAKDGV NLFAGDKYGG LSEMALFYIG
GIIKHARAIN AFANPSTNSY KRLIPHFEAP VMLAYSAANR SASIRIPMVP SAKGRRIELR
FGDPMANPYL AFSAMLMAGL DGIQNKIHPG EAMDKDLYDL PPEEAAEIPT VATSLENALE
CLDADREFLT RGEVFCNDFI DSYIALKSAD VERVNQTTHP VEFELYYSL
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