Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0284 |
Symbol | |
ID | 5610445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 334444 |
End bp | 334980 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640931116 |
Product | hypothetical protein |
Protein accession | YP_001472025 |
Protein GI | 157373425 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000217224 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGTTTAG CTCTTATTTT CAGTCTTTTG CTTTTTACAG TGATCTCCCA TGCGGCTGTT TATAAATGGG TCGACAAAGA TGGCAAGATC CACTATTCAG ATAAGCCAAT ACAGAATTCA GAAGTCGTCG AATTTAAAAG TAACACTCAA AACCAGATCA CAATCCAGGC TCCCAAAAAT TCAGCTTCTG ATACAGAAGA GCAAACAGTA CCTTCTACTC AGTATAAAAT GAGTATTCTA ACGCCAAAAG AAGATGAAAC CATTCGAGAT AATAATGGCG ATATCACCAT AATGGCGACA ATAACACCCG ATCTGAAACC CAAGCATCTA CTCGTCATTT TGATGGACGA CAAGGTGATT GGCCCCGCGC AAGAAAACCC TATCTTTAGT CTTAAAAATA TTGACCGTGG CGAACACTCT TTCGTCATTA AAGCGGTAGC CCAAAATGGC AAACAACTTG CAACGACTTC ACCAAGGAAG ATCTTTCTCC ACCGAGCCAT AATAAACAGT AAGGCAAAAG TCACTCCTTT TAATTAG
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Protein sequence | MRLALIFSLL LFTVISHAAV YKWVDKDGKI HYSDKPIQNS EVVEFKSNTQ NQITIQAPKN SASDTEEQTV PSTQYKMSIL TPKEDETIRD NNGDITIMAT ITPDLKPKHL LVILMDDKVI GPAQENPIFS LKNIDRGEHS FVIKAVAQNG KQLATTSPRK IFLHRAIINS KAKVTPFN
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